Files in FelixErnst/Structstrings
Implementation of the dot bracket annotations with Biostrings
.Rbuildignore
.github/.gitignore
.github/workflows/check-bioc-devel.yml
.github/workflows/check-bioc.yml
.gitignore
DESCRIPTION
NAMESPACE
NEWS
R/AllGenerics.R
R/Structstrings-DotBracket-io.R
R/Structstrings-DotBracketDataFrame.R
R/Structstrings-DotBracketString.R
R/Structstrings-DotBracketStringSet.R
R/Structstrings-DotBracketStringSetList.R
R/Structstrings-LoopIndexList.R
R/Structstrings-StructuredXStringSet.R
R/Structstrings-alphabet.R
R/Structstrings-conversion.R
R/Structstrings.R
R/utils.R
R/zzz.R
README.md
data/dbs.rda
data/nseq.rda
inst/include/Structstrings_defines.h
inst/include/Structstrings_interface.h
inst/include/_Structstrings_stubs.c
man/DotBracketDataFrame.Rd
man/DotBracketString.Rd
man/DotBracketStringSet-io.Rd
man/LoopIndexList.Rd
man/Structstrings-data.Rd
man/Structstrings-internals.Rd
man/Structstrings-package.Rd
man/Structstrings.Rd
man/StructuredXStringSet.Rd
man/convertAnnotation.Rd
man/getBasePairing.Rd
pkgdown/_pkgdown.yml
src/DotBracketDataFrame_class.c
src/IRanges_stubs.c
src/R_init_Structstrings.c
src/S4Vectors_stubs.c
src/Structstrings.h
src/Structstrings.so
src/utils.c
tests/testthat.R
tests/testthat/test-DotBracketDataFrame.R
tests/testthat/test-DotBracketStringSet-io.R
tests/testthat/test-DotBracketStringSet.R
tests/testthat/test-LoopIndexList.R
tests/testthat/test-StructuredXStringSet.R
tests/testthat/test-conversion.R
vignettes/Structstrings.Rmd
vignettes/references.bib
