calculate_IBS: Generate dissimilarity matrix (1-IBS) between all pairs of...
In FellouMada/rSNPdata: R package for Analysis of P. falciparum whole genome SNPs data
calculate_IBS R Documentation
Generate dissimilarity matrix (1-IBS) between all pairs of isolates
Description
Generate dissimilarity matrix (1-IBS) between all pairs of isolates
Usage
snpdata = calculate_IBS(snpdata, mat.name="GT")
Arguments
snpdata
SNPdata object
mat.name
the name of the genotype table to be used. default="GT"
Value
SNPdata object with an extra field: IBS
FellouMada/rSNPdata documentation built on June 12, 2022, 7:29 p.m.
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| calculate_IBS | R Documentation |
Generate dissimilarity matrix (1-IBS) between all pairs of isolates
Description
Generate dissimilarity matrix (1-IBS) between all pairs of isolates
Usage
snpdata = calculate_IBS(snpdata, mat.name="GT")
Arguments
snpdata |
SNPdata object |
mat.name |
the name of the genotype table to be used. default="GT" |
Value
SNPdata object with an extra field: IBS
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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