API for Fjeanneret/multiSight
Multi-omics Classification, Functional Enrichment and Network Inference analysis
| Global functions | |
|---|---|
| addEdgeWidth | Source code |
| addEnrichIDUrl | Source code |
| app_server | Source code |
| app_sys | Source code |
| app_ui | Source code |
| assessPerformance_Biosigner | Man page Source code |
| assessPerformance_Diablo | Man page Source code |
| biosignerRes | Man page |
| builDeseqAnalysis | Source code |
| buildCovarianceDesign | Source code |
| buildFeatTable | Man page Source code |
| buildNetworkD3 | Source code |
| buildNetworkInference | Source code |
| buildPubmedQuery | Source code |
| buildStoufferTable | Source code |
| checkConvFeat | Source code |
| checkSampleOverlap | Source code |
| col_1 | Source code |
| col_10 | Source code |
| col_12 | Source code |
| col_2 | Source code |
| col_3 | Source code |
| col_4 | Source code |
| col_6 | Source code |
| col_8 | Source code |
| computeFeatDetails | Source code |
| convertToEntrezid | Man page Source code |
| correlationNetworkInference | Man page Source code |
| deseqRes | Man page |
| detectTypeEnrich | Source code |
| diabloRes | Man page |
| display | Source code |
| displayDESeqtables | Source code |
| displayFeatDetails | Source code |
| displayPubmed | Source code |
| emFromStouffer | Source code |
| enrichResList | Man page |
| enrichWP | Man page Source code |
| fillEnrichGeneID | Source code |
| flattenCorrMatrix | Source code |
| formatEnrichTable | Source code |
| formatStoufferTable | Source code |
| getClassif | Source code |
| getData | Source code |
| getDataSelectedFeatures | Man page Source code |
| getDbFromInput | Source code |
| getEnrichment | Source code |
| getNetwork | Source code |
| getPubMed | Source code |
| getSelectedFeatures | Source code |
| get_golem_config | Source code |
| jq_hide | Source code |
| list_to_li | Source code |
| list_to_p | Source code |
| loadMultiOmicData | Source code |
| mat2graph | Source code |
| mergePubmedQuery | Source code |
| mod_MLmodels_server | Source code |
| mod_MLmodels_ui | Source code |
| mod_dashboard_structure_server | Source code |
| mod_dashboard_structure_ui | Source code |
| mod_hypothesisGenerator_server | Man page Source code |
| mod_hypothesisGenerator_ui | Source code |
| mod_understand_server | Man page Source code |
| mod_understand_ui | Man page Source code |
| mod_user_input_server | Man page Source code |
| mod_user_input_ui | Source code |
| mutualInformationNI | Man page Source code |
| named_to_li | Source code |
| omic2 | Man page |
| omicWeight | Source code |
| organismList | Source code |
| partialCorrelationNI | Man page Source code |
| pubmedInsight | Man page Source code |
| rep_br | Source code |
| runComponentNumberTest | Source code |
| runFeatureNumberTuning | Man page Source code |
| runMultiDeseqAnalysis | Man page Source code |
| runMultiEnrichment | Man page Source code |
| runMultiEnrichment_result | Man page |
| runMultiOmicEnrichment | Source code |
| runSPLSDA | Man page Source code |
| runSVMRFmodels_Biosigner | Man page Source code |
| run_app | Man page Source code |
| splitDatatoTrainTest | Man page Source code |
| stoufferTable | Man page Source code |
| tagRemoveAttributes | Source code |
| termsimJC | Source code |
| uiResultExport | Source code |
| undisplay | Source code |
| with_red_star | Source code |
| zeroVarRmv | Source code |
