enrichWP: Util function From clusterProfiler
In Fjeanneret/multiSight: Multi-omics Classification, Functional Enrichment and Network Inference analysis
View source: R/mod_understand_fct_enrichment.R
enrichWP R Documentation
Util function From clusterProfiler
Description
Downloads wikiPathways data and computes ORA analysis with
provided features.
Usage
enrichWP(gene, organism, pAdjustMethod, minGSSize, maxGSSize)
Arguments
gene
Features to enrich.
organism
Value chosen by user in Home tab..
pAdjustMethod, minGSSize, maxGSSize
Numeric values chosen by user in
Biological Insights tab.
Value
enrichResult object with wikiPAthways database used.
Fjeanneret/multiSight documentation built on April 6, 2022, 7:59 a.m.
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View source: R/mod_understand_fct_enrichment.R
| enrichWP | R Documentation |
Util function From clusterProfiler
Description
Downloads wikiPathways data and computes ORA analysis with provided features.
Usage
enrichWP(gene, organism, pAdjustMethod, minGSSize, maxGSSize)
Arguments
gene |
Features to enrich. |
organism |
Value chosen by user in Home tab.. |
pAdjustMethod, minGSSize, maxGSSize |
Numeric values chosen by user in Biological Insights tab. |
Value
enrichResult object with wikiPAthways database used.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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