runSVMRFmodels_Biosigner: MLmodels biosigner function

In Fjeanneret/multiSight: Multi-omics Classification, Functional Enrichment and Network Inference analysis

MLmodels biosigner function

Description

A model and selection features function from biosigner.

Usage

runSVMRFmodels_Biosigner(dataTrain)

Arguments

dataTrain

Data train set to build classification models. Returned by splitDatatoTrainTest(). List of Omic blocks and Y class vector.

Value

Models and features selected for each omic block in dataTrain.

Examples

data("omic2", package = "multiSight")
splitData <- splitDatatoTrainTest(omic2, 0.8)
data.train <- splitData$data.train
data.test <- splitData$data.test

#biosignerRes <- runSVMRFmodels_Biosigner(data.train)
data("biosignerRes", package = "multiSight") 
biosignerModels <- biosignerRes$model #list of SVM/RF models for each omic.
biosignerFeats <- biosignerRes$biosignature #selected features for each omic.

Fjeanneret/multiSight documentation built on April 6, 2022, 7:59 a.m.