Files in Fjeanneret/multiSight

Multi-omics Classification, Functional Enrichment and Network Inference analysis

CODE_OF_CONDUCT.md

DESCRIPTION

LICENSE

NAMESPACE

NEWS.md R/app_config.R R/app_server.R R/app_ui.R R/data.R R/golem_utils_server.R R/golem_utils_ui.R R/mod_MLmodels.R R/mod_MLmodels_fct_biosigner.R R/mod_MLmodels_fct_diablo.R R/mod_MLmodels_utils.R R/mod_dashboard_structure.R R/mod_home.R R/mod_hypothesisGenerator.R R/mod_hypothesisGenerator_fct_NetworkInference.R R/mod_hypothesisGenerator_fct_PubmedInsight.R R/mod_hypothesisGenerator_utils_.R R/mod_understand.R R/mod_understand_fct_enrichment.R R/mod_understand_utils.R R/mod_user_input.R R/mod_user_input_utils.R R/mod_user_output.R R/run_app.R

R/sysdata.rda

README.Rmd README.md

data/biosignerRes.rda

data/deseqRes.rda

data/diabloRes.rda

data/enrichResList.rda

data/omic2.rda

data/runMultiEnrichment_result.rda

inst/app/www/biologicalInsight/bio1.png

inst/app/www/biologicalInsight/bio2.png

inst/app/www/biologicalInsight/bio3.png

inst/app/www/biologicalInsight/bio4.png

inst/app/www/classification/classif1.png

inst/app/www/classification/classif2.png

inst/app/www/classification/classif3.png

inst/app/www/home/home1.png

inst/app/www/home/home2.png

inst/app/www/home/home3.png

inst/app/www/multiSight_hexicon.png

inst/app/www/networkInf/assump1.png

inst/app/www/networkInf/assump2.png

inst/app/www/networkInf/assump3.png

man/assessPerformance_Biosigner.Rd man/assessPerformance_Diablo.Rd man/biosignerRes.Rd man/buildFeatTable.Rd man/convertToEntrezid.Rd man/correlationNetworkInference.Rd man/deseqRes.Rd man/diabloRes.Rd man/enrichResList.Rd man/enrichWP.Rd man/getDataSelectedFeatures.Rd man/mod_hypothesisGenerator_server.Rd man/mod_understand_server.Rd man/mod_understand_ui.Rd man/mod_user_input_server.Rd man/mutualInformationNI.Rd man/omic2.Rd man/partialCorrelationNI.Rd man/pubmedInsight.Rd man/runFeatureNumberTuning.Rd man/runMultiDeseqAnalysis.Rd man/runMultiEnrichment.Rd man/runMultiEnrichment_result.Rd man/runSPLSDA.Rd man/runSVMRFmodels_Biosigner.Rd man/run_app.Rd man/splitDatatoTrainTest.Rd man/stoufferTable.Rd report.Rmd tests/testthat.R tests/testthat/test-classification.R tests/testthat/test-golem-recommended.R tests/testthat/test-networkInference.R

vignettes/.gitignore

vignettes/EnrichmentMapForInstance.png

vignettes/multiSight.Rmd zzz.R

Fjeanneret/multiSight documentation built on April 6, 2022, 7:59 a.m.