README.md
In FloWuenne/cropseq.analysis:
cropseq.analysis
A collection of functions to prepare and analyze single cell CRISPR perturbation screens using the CROP-seq approach or pooled CRISPR screens
Installation
Install the package using the devtools install_github function as shown below:
library(devtools)
install_github("FloWuenne/cropseq.analysis")
Functions
create_sgRNA_reference()
Uses a data frame as input and will create a fasta and gtf file containing all the guide RNA sequences merged with the 250bp upstream hU6 promoter sequences as well as the downstream gRNA backbone + 3'LTR sequence.
FloWuenne/cropseq.analysis documentation built on May 27, 2019, 3:29 p.m.
R Package Documentation
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Note that we can't provide technical support on individual packages. You should contact the package authors for that.
cropseq.analysis
A collection of functions to prepare and analyze single cell CRISPR perturbation screens using the CROP-seq approach or pooled CRISPR screens
Installation
Install the package using the devtools install_github function as shown below:
library(devtools)
install_github("FloWuenne/cropseq.analysis")
Functions
create_sgRNA_reference()
Uses a data frame as input and will create a fasta and gtf file containing all the guide RNA sequences merged with the 250bp upstream hU6 promoter sequences as well as the downstream gRNA backbone + 3'LTR sequence.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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