get_mapped_reads: get_mapped_reads
In FrietzeLabUVM/ssvQC: QC for enrichment based NGS
View source: R/functions_misc.R
get_mapped_reads R Documentation
get_mapped_reads
Description
get_mapped_reads
Usage
get_mapped_reads(bam_file)
Arguments
bam_file
A bam file. Matching .bai file must exist.
Value
The number of mapped reads in bam file.
Examples
bam_file = system.file("extdata/MCF10A_CTCF_R1.100peaks.bam", package = "ssvQC")
get_mapped_reads(bam_file)
FrietzeLabUVM/ssvQC documentation built on Jan. 20, 2025, 8:19 a.m.
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View source: R/functions_misc.R
| get_mapped_reads | R Documentation |
get_mapped_reads
Description
get_mapped_reads
Usage
get_mapped_reads(bam_file)
Arguments
bam_file |
A bam file. Matching .bai file must exist. |
Value
The number of mapped reads in bam file.
Examples
bam_file = system.file("extdata/MCF10A_CTCF_R1.100peaks.bam", package = "ssvQC")
get_mapped_reads(bam_file)
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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