eds.test: eds.test

Description Usage Arguments Value Examples

View source: R/qrt_pcr.R

Description

eds.test

Usage

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eds.test(data, Reference_gene, Measured_genes, Experimental_conditions = NULL,
  Replicate_id = "_")

Arguments

data

This is a list from the eds.summary function

Reference_gene

The name of your reference gene that you are measuring relative expression against as a character

Measured_genes

A vector of the genes you are measuing as characters

Experimental_conditions

If you have multiple experimental conditions that you want to compare this is a character vector of those conditions. By default it is NULL

Value

This is the function that produces the results. Essentially it uses the ddCT method to produce a list of dataframes, one for each gene. Each dataframe contains the mean, sd and se for each sample. There is also a "Gene and Condition" tag to make plotting easy.

Examples

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Measured_genes <- c("GOI_1", "GOI_2")
eds.test(test2, "PDF2", Measured_genes, Experimental_conditions = Experimental_conditions)

G-Thomson/gthor documentation built on Jan. 27, 2018, 9:21 a.m.