flr.summary: flr.summary

Description Usage Arguments Value Examples

View source: R/flowering_time.R

Description

flr.summary

Usage

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flr.summary(data, LoI, group = sowing_number, WT = "R108")

Arguments

data

This is a dataframe of flowering time fata with the following columns; Sowing.Number, Conditions, Genotype (of parent seed), Individual, Plant.Number, Date.Sown, Date.Flowered, Number.of.Days.to.First.Floral.Bud, Position.of.1st.Floral.Bud, Node.Number.of.Main.Axis.at.1st.Floral.Bud, Comments and Mutant.

LoI

These are the Lines of Interest to be examined. Enter these as a vector of sowing numbers as characters.

group

Data can be grouped either by by sowing number (sowing_number), growth conditions (conditions) or mutantion genotype (mutant). Only these options are possible. When data is grouped by conditions the sowing numbers column is a list in case multiple sowing numbers are included.

Value

This function summarises a flowering time data frame producing a dataframe of the summarised data grouped either by sowing number or growth conditions. Means and 95 intervals are calculated. A list column containing the raw data and mutant status if applicable is also included.

Examples

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data = Mid_2016
# Lines of interest
LoI <- c("P880", "P881", "P883", "Q022", "Q023", "P935", "P938", "P936", "P939")
flr.summary(flowering_data , LoI)

G-Thomson/gthor documentation built on Jan. 27, 2018, 9:21 a.m.