geno: A genotype matrix.

Description Usage Format Source

Description

A dataset containing the genotypes of 927 SNPs on 5,000 individuals.

Usage

1

Format

A data matrix with 5000 rows and 927 columns:

The genotype data matrix was generated by PLINK from .bed, .bim and .fam files based on appropriate reference alleles. In the analyses, the applied reference alleles among training data, testing data and consortium data should be identical. The individuals in the phenotype data were match with .fam file (i.e. the number of individuals and the order of individuals should be same); The number of SNPs in prediction variable matrix annotations is matched with that in .bim data;

Source

http://zzz.bwh.harvard.edu/plink/


GMELab/GraBLD documentation built on May 4, 2019, 3:20 p.m.