Files in GeraldCNelson/nutmod
Modeling Nutrient Intake and Share of Requirements for Plausible Futures

.gitignore
DESCRIPTION
LICENSE
NAMESPACE
R/KcalsComparisons.R R/USAIDPriorities.R R/USAIDnutrientRanking.R R/YieldDelta.R R/aggNorder.R R/aggRun.AfrAgFutures.R R/aggRun.R R/automate.R R/cFreshD_cleanup.R R/copyFilestoNutrientModeling.R R/copyFilestoNutrientPriorities.R R/countryResultsForPaper.R R/createIMPACT159Regions.R R/cropVarietyManager.R R/dataManagement.IMPACT.R R/dataManagement.Pop.R R/dataManagement.SSPPop.R R/dataManagement.fishnAlc.R R/dataManagement.foodNnuts.R R/dataManagement.regionAgg.R R/dataManagementVars.R R/dataManagementYields.R R/dataPrep.FBS.R R/dataPrep.IMPACT.R R/dataPrep.NutrientRequirements.R R/dataPrep.ODBCaccess.R R/dataPrep.SSP.R R/dataPrep.UNscenarios.R R/dataPrep.genusData.R R/dataPrep.metadata.R R/dataPrep.regions.R R/dataPrepFAOdownload.R R/dataPrepFishStat.R R/dataPrepFortification.R R/dataPrepSingleScenario.R R/dataPrepUSDANuts.R R/dataPrepYields.R R/diversityMetrics.R R/elasticitiesCalcs.R R/finalGraphCreation.R R/fishnAlcNew.R R/gdxrrwSetup.R R/nutCalcsGraphing.R R/nutCalcsProcessing.R R/nutModSpiderGraph.R R/nutrientCalcFunctions.R R/nutrientCalcs.R R/nutrientModFunctions.R R/nutsByFG.R R/optimizer.R R/presentation.R R/presentationAfricanAgFutures.R R/presentationAfricanAgFuturesYields.R R/renameUSAIDscenarios.R R/reqRatioStats.R R/spatialPlots.R R/staplesShare.R R/technicalReportStuff.R R/workBookFunctions.R R/workSheetCreation.R R/xfoodcountcode.R R/yearConversion.R
Readme.docx
Readme.html
Readme.rmd
Rnw/compileDiversity_WB.Rnw
Rnw/compileDiversity_tenregion.Rnw
Rnw/compileFig1_WB.Rnw
Rnw/compileFig1_tenregion.Rnw
Rnw/compileFig8_WB.Rnw
Rnw/compileFig8_tenregion.Rnw
Rnw/compileFig9_WB.Rnw
Rnw/compileFig9_tenregion.Rnw
Rnw/compileFoodgroupAdequacy_WB.Rnw
Rnw/compileFoodgroupAdequacy_tenregion.Rnw
Rnw/compileFoodgroupAvailability1_WB.Rnw
Rnw/compileFoodgroupAvailability1_tenregion.Rnw
Rnw/compileFoodgroupAvailability2_WB.Rnw
Rnw/compileFoodgroupAvailability2_tenregion.Rnw
Rnw/compileFoodgroupAvailability3_WB.Rnw
Rnw/compileFoodgroupAvailability3_tenregion.Rnw
Rnw/compileMacroAMDR_WB.Rnw
Rnw/compileMacroAMDR_tenregion.Rnw
Rnw/compileMacroAdequacy_WB.Rnw
Rnw/compileMacroAdequacy_tenregion.Rnw
Rnw/compileMinrlsAdequacy_WB.Rnw
Rnw/compileMinrlsAdequacy_tenregion.Rnw
Rnw/compileNBS_WB.Rnw
Rnw/compileNBS_tenregion.Rnw
Rnw/compilePDF_tenregion.Rnw
Rnw/compileVitsAdequacy_WB.Rnw
Rnw/compileVitsAdequacy_tenregion.Rnw
data-raw/FBSData/FAOCountryNameCodeLookup.xlsx
data-raw/FBSData/FBStoIMPACTlookupV3.xlsx
data-raw/IMPACTData/CSEs20150824.xlsx
data-raw/IMPACTData/Fish Elasticities and Quantities IMPACT.xlsx
data-raw/IMPACTData/IMPACT regions update Aug 28 2016.xlsx
data-raw/IMPACTData/IMPACT regions update June 6 2016.xlsx
data-raw/IMPACTData/IMPACT-agg-regionsFeb2016.xlsx
data-raw/IMPACTData/IMPACTRegionsFeb2016.xlsx
data-raw/ISOCountrycodes.xlsx
data-raw/NutrientData/AusData/NUTTAB 2010 - Retention Factor File.xls
data-raw/NutrientData/AusData/NUTTAB 2010 - Retention Factor File.xlsx
data-raw/NutrientData/AusData/NUTTAB 2010 - Vitamin D File fixes.xls
data-raw/NutrientData/AusData/REVISED Complete Explanatory Notes with Attachments may 2011.pdf
data-raw/NutrientData/AusData/Trans Fatty acids-NUTTAB 20101.xls
data-raw/NutrientData/GENus_FCTs/FCT_GENuS_ASEANFoods.RData
data-raw/NutrientData/GENus_FCTs/FCT_GENuS_India.RData
data-raw/NutrientData/GENus_FCTs/FCT_GENuS_LATINFoods.RData
data-raw/NutrientData/GENus_FCTs/FCT_GENuS_NEASIA.RData
data-raw/NutrientData/GENus_FCTs/FCT_GENuS_OldAfrica.RData
data-raw/NutrientData/GENus_FCTs/FCT_GENuS_US.RData
data-raw/NutrientData/GENus_FCTs/FCT_GENuS_WestAfrica.RData
data-raw/NutrientData/NutrientCodeLookup.xlsx
data-raw/NutrientData/countryCropVariety.xlsx
data-raw/NutrientData/nutrientDetails/DRI_IOM_V8.xlsx
data-raw/NutrientData/nutrientDetails/IMPACTcodeLookup.xlsx
data-raw/NutrientData/nutrientDetails/SSP_DRI_ageGroupLookUp.xlsx
data-raw/NutrientData/nutrientDetails/USDAcookingretn06.xlsx
data-raw/NutrientData/nutrientDetails/c_OMarnData.xlsx
data-raw/NutrientData/nutrientDetails/comp_fct_beans_cbean wphytate.xlsx
data-raw/NutrientData/nutrientDetails/comp_fct_mutton and goat_clamb wphytate.xlsx
data-raw/NutrientData/nutrientDetails/comp_fct_rape and mustard oil_crpol wphytate.xlsx
data-raw/NutrientData/nutrientDetails/comp_recalc_c_Crust_crustaceans_FCT_EPC_012916 wphytate.xlsx
data-raw/NutrientData/nutrientDetails/comp_recalc_c_FrshD_freshwater_Diadr_FCT_EPC_012916 wphytate.xlsx
data-raw/NutrientData/nutrientDetails/comp_recalc_c_Mllsc_mollusks_FCT_EPC_012916 wphytate.xlsx
data-raw/NutrientData/nutrientDetails/comp_recalc_c_ODmrsl_demersal_FCT_EPC_012916 wphytate.xlsx
data-raw/NutrientData/nutrientDetails/comp_recalc_c_OPelag_Pelagic_FCT_EPC_012916 wphytate.xlsx
data-raw/NutrientData/nutrientDetails/comp_recalc_cocer_cereals_FCT wphytate.xlsx
data-raw/NutrientData/nutrientDetails/comp_recalc_copul_pulses__FCT wphytate.xlsx
data-raw/NutrientData/nutrientDetails/comp_recalc_cothr_othcrops_treenuts_FCT wphytate.xlsx
data-raw/NutrientData/nutrientDetails/comp_recalc_csubf_fruits_Subtrop wphytate.xlsx
data-raw/NutrientData/nutrientDetails/comp_recalc_ctemf_fruits_Other_FCT wphytate.xlsx
data-raw/NutrientData/nutrientDetails/comp_recalc_ctols_oilcrops_FCT_V2 wphytate.xlsx
data-raw/NutrientData/nutrientDetails/comp_recalc_cvege_vegetables_FCT wphytate.xlsx
data-raw/NutrientData/nutrientDetails/composites.lookup.fish.xlsx
data-raw/NutrientData/nutrientDetails/composites.lookup.nofish.xlsx
data-raw/NutrientData/nutrientDetails/composites.lookup.xlsx
data-raw/NutrientData/nutrientDetails/food commodity to food group table V4.xlsx
data-raw/NutrientData/nutrientDetails/old/Crustaceans_Composite_2011-2013__USDAcodes_FCT_EPC_012916.xlsx
data-raw/NutrientData/nutrientDetails/old/Demersal_Composite_2011-2013_USDAcodes_FCT_EPC_012916.xlsx
data-raw/NutrientData/nutrientDetails/old/Freshwater_Diadromous_Composite_2011-2013_USDAcodes_FCT_EPC_012916.xlsx
data-raw/NutrientData/nutrientDetails/old/Mollusks_Composite_2011-2013_USDAcodes_FCT_EPC_012916.xlsx
data-raw/NutrientData/nutrientDetails/old/composite FCT_cereals_cocer.xls
data-raw/NutrientData/nutrientDetails/old/composite FCT_oil crops_ctols.xls
data-raw/NutrientData/nutrientDetails/old/composite FCT_other fruits_ctemf.xls
data-raw/NutrientData/nutrientDetails/old/composite FCT_pulses_copul.xls
data-raw/NutrientData/nutrientDetails/old/composite FCT_treenuts_cothr.xls
data-raw/NutrientData/nutrientDetails/old/composite FCT_tropical fruits_csubf.xls
data-raw/NutrientData/nutrientDetails/phytate for composites.xlsx
data-raw/NutrientData/nutrientDetails/phytateSources.csv
data-raw/NutrientData/nutrientDetails/phytateSources.xlsx
data-raw/NutrientData/nutrientDetails/retentionLookup.xlsx
data-raw/NutrientData/nutrientNames_Units.xlsx
data-raw/SSPData/SspDb_country_data_2013-06-12.csv.zip
data-raw/WorldBankIncomeGroupMap.xlsx
data-raw/descriptionLookup.csv
data-raw/regions lookup June 15 2018.xlsx
data-raw/regions lookup Sep 6 2016.xlsx
data/IMPACTData/~$dt.IMPACTfood.2016-04-10.xlsx
graphics/README.graphics.folder.txt
nutmod.Rproj
nutrientModeling/app.R
nutrientModeling/data/USAID
nutrientModeling/data/gdxInfo.csv
nutrientModeling/global.R
nutrientModeling/www/AMDRText.html
nutrientModeling/www/MRVText.html
nutrientModeling/www/NBscore.png
nutrientModeling/www/RAOqe.png
nutrientModeling/www/RAOscale.png
nutrientModeling/www/RaosQEGraphText.html
nutrientModeling/www/ShanDiv.png
nutrientModeling/www/acknowledgementsText.html
nutrientModeling/www/adequacyText.html
nutrientModeling/www/adequacyWeightedRequirement.html
nutrientModeling/www/affordabilityText.html
nutrientModeling/www/availabilityText.html
nutrientModeling/www/bootstrap.css
nutrientModeling/www/bootstrap.min.css
nutrientModeling/www/cerulean.css
nutrientModeling/www/countryChoice.html
nutrientModeling/www/cyborg.css
nutrientModeling/www/di.png
nutrientModeling/www/diversityText.html
nutrientModeling/www/downloadFullText.html
nutrientModeling/www/flatly.css
nutrientModeling/www/foodGroupSpiderGraphText.html
nutrientModeling/www/furtherInformation.html
nutrientModeling/www/glossaryText.html
nutrientModeling/www/introText.html
nutrientModeling/www/logos/Illinois.png
nutrientModeling/www/logos/csiro.png
nutrientModeling/www/logos/ifpri.jpg
nutrientModeling/www/logos/ucdavis.png
nutrientModeling/www/nonStapleShareGraphText.html
nutrientModeling/www/nutbalGraphText.html
nutrientModeling/www/nutrientDescription.html
nutrientModeling/www/nutrientLookupText.html
nutrientModeling/www/qij.png
nutrientModeling/www/shannonDiversityText.html
nutrientModeling/www/staplesSpiderGraphText.html
nutrientModeling/www/tableNote_AMDR.html
nutrientModeling/www/tableNote_affordability.html
nutrientModeling/www/tableNote_nonstapleShare.html
nutrientPriorities/app.R nutrientPriorities/global.R
nutrientPriorities/www/AMDRText.html
nutrientPriorities/www/MRVText.html
nutrientPriorities/www/NBscore.png
nutrientPriorities/www/RAOqe.png
nutrientPriorities/www/RAOscale.png
nutrientPriorities/www/RaosQEGraphText.html
nutrientPriorities/www/ShanDiv.png
nutrientPriorities/www/acknowledgementsText.html
nutrientPriorities/www/adequacyText.html
nutrientPriorities/www/adequacyWeightedRequirement.html
nutrientPriorities/www/affordabilityText.html
nutrientPriorities/www/availabilityText.html
nutrientPriorities/www/bootstrap.css
nutrientPriorities/www/bootstrap.min.css
nutrientPriorities/www/cerulean.css
nutrientPriorities/www/countryChoice.html
nutrientPriorities/www/cyborg.css
nutrientPriorities/www/di.png
nutrientPriorities/www/diversityText.html
nutrientPriorities/www/downloadFullText.html
nutrientPriorities/www/flatly.css
nutrientPriorities/www/foodGroupSpiderGraphText.html
nutrientPriorities/www/furtherInformation.html
nutrientPriorities/www/glossaryText.html
nutrientPriorities/www/introText.html
nutrientPriorities/www/introText.html.old
nutrientPriorities/www/logos/Illinois.png
nutrientPriorities/www/logos/csiro.png
nutrientPriorities/www/logos/ifpri.jpg
nutrientPriorities/www/logos/ucdavis.png
nutrientPriorities/www/nonStapleShareGraphText.html
nutrientPriorities/www/nutbalGraphText.html
nutrientPriorities/www/nutrientDescription.html
nutrientPriorities/www/nutrientLookupText.html
nutrientPriorities/www/qij.png
nutrientPriorities/www/shannonDiversityText.html
nutrientPriorities/www/staplesSpiderGraphText.html
nutrientPriorities/www/tableNote_AMDR.html
nutrientPriorities/www/tableNote_affordability.html
nutrientPriorities/www/tableNote_nonstapleShare.html
nutrientPriorities/www/weightedRDA/gwd_workspace.json
nutrientPriorities/www/weightedRDA/weightedRDA.html
results/.Rapp.history
results/README.results.folder.txt
results/gdxInfo.csv
GeraldCNelson/nutmod documentation built on Nov. 7, 2018, 4 a.m.