Files in GeraldCNelson/nutmod
Calculates nutrient information worldwide
.gitignore
DESCRIPTION
LICENSE
NAMESPACE
R/aggNorder.R
R/aggRun.R
R/automate.R
R/copyFilestoNutrientModeling.R
R/cropVarietyManager.R
R/dataManagement.IMPACT.R
R/dataManagement.Pop.R
R/dataManagement.fishnAlc.R
R/dataManagement.foodNnuts.R
R/dataManagementVars.R
R/dataPrep.FBS.R
R/dataPrep.IMPACT.R
R/dataPrep.NutrientRequirements.R
R/dataPrep.ODBCaccess.R
R/dataPrep.SSP.R
R/dataPrep.metadata.R
R/dataPrep.regions.R
R/dataPrepFishStat.R
R/dataPrepSingleScenario.R
R/dataPrepUSDANuts.R
R/dataPrepYields.R
R/diversityMetrics.R
R/finalGraphCreation.R
R/nutCalcsProcessing.R
R/nutrientCalcFunctions.R
R/nutrientCalcs.R
R/nutrientModFunctions.R
R/spatialPlots.R
R/workBookFunctions.R
Readme.md
Rnw/compileDiversity_WB.Rnw
Rnw/compileDiversity_tenregion.Rnw
Rnw/compileFig1_WB.Rnw
Rnw/compileFig1_tenregion.Rnw
Rnw/compileFig8_WB.Rnw
Rnw/compileFig8_tenregion.Rnw
Rnw/compileFig9_WB.Rnw
Rnw/compileFig9_tenregion.Rnw
Rnw/compileFoodgroupAdequacy_WB.Rnw
Rnw/compileFoodgroupAdequacy_tenregion.Rnw
Rnw/compileFoodgroupAvailability1_WB.Rnw
Rnw/compileFoodgroupAvailability1_tenregion.Rnw
Rnw/compileFoodgroupAvailability2_WB.Rnw
Rnw/compileFoodgroupAvailability2_tenregion.Rnw
Rnw/compileFoodgroupAvailability3_WB.Rnw
Rnw/compileFoodgroupAvailability3_tenregion.Rnw
Rnw/compileMacroAMDR_WB.Rnw
Rnw/compileMacroAMDR_tenregion.Rnw
Rnw/compileMacroAdequacy_WB.Rnw
Rnw/compileMacroAdequacy_tenregion.Rnw
Rnw/compileMinrlsAdequacy_WB.Rnw
Rnw/compileMinrlsAdequacy_tenregion.Rnw
Rnw/compileNBS_WB.Rnw
Rnw/compileNBS_tenregion.Rnw
Rnw/compilePDF_tenregion.Rnw
Rnw/compileVitsAdequacy_WB.Rnw
Rnw/compileVitsAdequacy_tenregion.Rnw
data-raw/FAOSTAT/FishStatData/GlobalProuction_2017.1.1/CL_FI_AREA_GROUPS.csv
data-raw/FAOSTAT/FishStatData/GlobalProuction_2017.1.1/CL_FI_SPECIES_GROUPS.csv
data-raw/FAOSTAT/FishStatData/GlobalProuction_2017.1.1/TS_FI_PRODUCTION.csv
data-raw/FAOSTAT/Production_Crops_E_All_Data.zip
data-raw/FAOSTAT/Production_LivestockPrimary_E_All_Data.zip
data-raw/FAOSTAT/Trade_Crops_Livestock_E_All_Data.zip
data-raw/FBSData/FAOCountryNameCodeLookup.xlsx
data-raw/FBSData/FBStoIMPACTlookupV3.xlsx
data-raw/FBSData/FoodBalanceSheets_E_All_Data.zip
data-raw/IMPACTData/CSEs20150824.xlsx
data-raw/IMPACTData/Fish Elasticities and Quantities IMPACT.xlsx
data-raw/IMPACTData/IMPACT regions update Aug 28 2016.xlsx
data-raw/IMPACTData/IMPACT-agg-regionsFeb2016.xlsx
data-raw/IMPACTData/IMPACTRegionsFeb2016.xlsx
data-raw/IMPACTData/IMPACT_FPU_Map.zip
data-raw/ISOCountrycodes.xlsx
data-raw/NutrientData/AusData/NUTTAB 2010 - Retention Factor File.xlsx
data-raw/NutrientData/AusData/REVISED Complete Explanatory Notes with Attachments may 2011.pdf
data-raw/NutrientData/NutrientCodeLookup.xlsx
data-raw/NutrientData/countryCropVariety.xlsx
data-raw/NutrientData/nutrientDetails/DRI_IOM_V8.xlsx
data-raw/NutrientData/nutrientDetails/IMPACTSingleCodeLookup.xlsx
data-raw/NutrientData/nutrientDetails/SSP_DRI_ageGroupLookUp.xlsx
data-raw/NutrientData/nutrientDetails/USDANutrientImputedValues.csv
data-raw/NutrientData/nutrientDetails/USDANutrientImputedValues.xlsx
data-raw/NutrientData/nutrientDetails/USDA_CookingYields_MeatPoultry02.xlsx
data-raw/NutrientData/nutrientDetails/USDAcookingretn06.xlsx
data-raw/NutrientData/nutrientDetails/c_OMarnData.xlsx
data-raw/NutrientData/nutrientDetails/comp_fct_beans_cbean wphytate.xlsx
data-raw/NutrientData/nutrientDetails/comp_fct_mutton and goat_clamb wphytate.xlsx
data-raw/NutrientData/nutrientDetails/comp_fct_rape and mustard oil_crpol wphytate.xlsx
data-raw/NutrientData/nutrientDetails/comp_recalc_c_Crust_crustaceans_FCT_EPC_012916 wphytate.xlsx
data-raw/NutrientData/nutrientDetails/comp_recalc_c_FrshD_freshwater_Diadr_FCT_EPC_012916 wphytate.xlsx
data-raw/NutrientData/nutrientDetails/comp_recalc_c_Mllsc_mollusks_FCT_EPC_012916 wphytate.xlsx
data-raw/NutrientData/nutrientDetails/comp_recalc_c_ODmrsl_demersal_FCT_EPC_012916 wphytate.xlsx
data-raw/NutrientData/nutrientDetails/comp_recalc_c_OPelag_Pelagic_FCT_EPC_012916 wphytate.xlsx
data-raw/NutrientData/nutrientDetails/comp_recalc_cocer_cereals_FCT wphytate.xlsx
data-raw/NutrientData/nutrientDetails/comp_recalc_copul_pulses__FCT wphytate.xlsx
data-raw/NutrientData/nutrientDetails/comp_recalc_cothr_othcrops_treenuts_FCT wphytate.xlsx
data-raw/NutrientData/nutrientDetails/comp_recalc_csubf_fruits_Subtrop wphytate.xlsx
data-raw/NutrientData/nutrientDetails/comp_recalc_ctemf_fruits_Other_FCT wphytate.xlsx
data-raw/NutrientData/nutrientDetails/comp_recalc_ctols_oilcrops_FCT_V2 wphytate.xlsx
data-raw/NutrientData/nutrientDetails/comp_recalc_cvege_vegetables_FCT wphytate.xlsx
data-raw/NutrientData/nutrientDetails/composites.lookup.fish.xlsx
data-raw/NutrientData/nutrientDetails/composites.lookup.nofish.xlsx
data-raw/NutrientData/nutrientDetails/food commodity to food group table V4.xlsx
data-raw/NutrientData/nutrientDetails/old/Crustaceans_Composite_2011-2013__USDAcodes_FCT_EPC_012916.xlsx
data-raw/NutrientData/nutrientDetails/old/Demersal_Composite_2011-2013_USDAcodes_FCT_EPC_012916.xlsx
data-raw/NutrientData/nutrientDetails/old/Freshwater_Diadromous_Composite_2011-2013_USDAcodes_FCT_EPC_012916.xlsx
data-raw/NutrientData/nutrientDetails/old/Mollusks_Composite_2011-2013_USDAcodes_FCT_EPC_012916.xlsx
data-raw/NutrientData/nutrientDetails/old/composite FCT_cereals_cocer.xls
data-raw/NutrientData/nutrientDetails/old/composite FCT_oil crops_ctols.xls
data-raw/NutrientData/nutrientDetails/old/composite FCT_other fruits_ctemf.xls
data-raw/NutrientData/nutrientDetails/old/composite FCT_pulses_copul.xls
data-raw/NutrientData/nutrientDetails/old/composite FCT_treenuts_cothr.xls
data-raw/NutrientData/nutrientDetails/old/composite FCT_tropical fruits_csubf.xls
data-raw/NutrientData/nutrientDetails/phytate for composites.xlsx
data-raw/NutrientData/nutrientDetails/phytateSources.csv
data-raw/NutrientData/nutrientDetails/phytateSources.xlsx
data-raw/NutrientData/nutrientDetails/phytateSourcesWOedibleshare.xlsx
data-raw/NutrientData/nutrientDetails/retentionLookup.xlsx
data-raw/NutrientData/sr28asc/FOOD_DES.txt
data-raw/NutrientData/sr28asc/NUTR_DEF.txt
data-raw/NutrientData/sr28asc/NUT_DATA.txt
data-raw/SSPData/SspDb_country_data_2013-06-12.csv.zip
data-raw/WorldBankIncomeGroupMap.xlsx
data-raw/descriptionLookup.csv
data-raw/finalGraphicsNames.csv
data-raw/regions lookup June 15 2018.xlsx
data/SSPs/IMPACTData/CGEPEcompare/dt.FoodAvailability.SSP2-HGEM-WithoutGLOBE
data/SSPs/IMPACTData/CGEPEcompare/dt.FoodAvailability.SSP2-HGEM2-WithGLOBE
data/SSPs/IMPACTData/CGEPEcompare/dt.PCX0.SSP2-HGEM-WithoutGLOBE
data/SSPs/IMPACTData/CGEPEcompare/dt.PCX0.SSP2-HGEM2-WithGLOBE
data/SSPs/IMPACTData/CGEPEcompare/dt.PopX0.SSP2-HGEM-WithoutGLOBE
data/SSPs/IMPACTData/CGEPEcompare/dt.PopX0.SSP2-HGEM2-WithGLOBE
data/SSPs/IMPACTData/CGEPEcompare/dt.pcGDPX0.SSP2-HGEM-WithoutGLOBE
data/SSPs/IMPACTData/CGEPEcompare/dt.pcGDPX0.SSP2-HGEM2-WithGLOBE
data/SSPs/IMPACTData/dt.FoodAvailability
data/SSPs/IMPACTData/dt.PCX0
data/SSPs/IMPACTData/dt.PWX0
data/SSPs/IMPACTData/dt.PopX0
data/SSPs/IMPACTData/dt.pcGDPX0
data/universalData/dt.FBS_2018-07-24.rds
data/universalData/worldMap_2018-11-08.rds
graphics/README.graphics.folder.txt
nutmod.Rproj
nutrientModeling/app.R
nutrientModeling/global.R
nutrientModeling/www/AMDRText.html
nutrientModeling/www/MRVText.html
nutrientModeling/www/NBscore.png
nutrientModeling/www/RAOqe.png
nutrientModeling/www/RAOscale.png
nutrientModeling/www/RaosQEGraphText.html
nutrientModeling/www/ShanDiv.png
nutrientModeling/www/acknowledgementsText.html
nutrientModeling/www/adequacyText.html
nutrientModeling/www/adequacyWeightedRequirement.html
nutrientModeling/www/affordabilityText.html
nutrientModeling/www/availabilityText.html
nutrientModeling/www/bootstrap.css
nutrientModeling/www/bootstrap.min.css
nutrientModeling/www/cerulean.css
nutrientModeling/www/countryChoice.html
nutrientModeling/www/cyborg.css
nutrientModeling/www/di.png
nutrientModeling/www/diversityText.html
nutrientModeling/www/downloadFullText.html
nutrientModeling/www/flatly.css
nutrientModeling/www/foodGroupSpiderGraphText.html
nutrientModeling/www/furtherInformation.html
nutrientModeling/www/glossaryText.html
nutrientModeling/www/introText.html
nutrientModeling/www/logos/Illinois.png
nutrientModeling/www/logos/csiro.png
nutrientModeling/www/logos/ifpri.jpg
nutrientModeling/www/logos/ucdavis.png
nutrientModeling/www/nonStapleShareGraphText.html
nutrientModeling/www/nutbalGraphText.html
nutrientModeling/www/nutrientDescription.html
nutrientModeling/www/nutrientLookupText.html
nutrientModeling/www/qij.png
nutrientModeling/www/shannonDiversityText.html
nutrientModeling/www/staplesSpiderGraphText.html
nutrientModeling/www/tableNote_AMDR.html
nutrientModeling/www/tableNote_affordability.html
nutrientModeling/www/tableNote_nonstapleShare.html
results/.Rapp.history
results/README.results.folder.txt
results/gdxInfo.csv
test.RDS
