Man pages for Gibbsdavidl/ProCoNA
Protein co-expression network analysis (ProCoNA).
| accessors | Accessors for the proconaNet S4 class |
| bootstrapProconaNetwork | bootstrapProconaNetwork |
| buildProconaNetwork | buildProconaNetwork |
| c2i | c2i |
| compareNetworksWithFishersExactTest | compareNetworksWithFishersExactTest |
| compareNetworksWithFishersExactTestProcona | compareNetworksWithFishersExactTestProcona |
| corBootstrap | corBootstrap |
| correlationWithPhenotypesHeatMap | correlationWithPhenotypesHeatMap |
| getFisherMatrix | getFisherMatrix |
| getPeptideNAs | getPeptideNAs |
| goStatTest | goStatTest |
| hclust | Class '"hclust"' |
| i2c | i2c |
| i2col | i2col |
| MMvsPS | Module members vs Peptide Significance |
| MMvsPSallModules | MMvsPSallModules |
| moduleMemberCorrelations | moduleMemberCorrelations |
| modulePhenotypeCorrelations | modulePhenotypeCorrelations |
| orderMatrixIndex | orderMatrixIndex |
| peptideConnectivityTest | peptideConnectivityTest |
| peptideCorrelationTest | peptideCorrelationTest |
| plotNet | plotNet |
| ppiPermTest | ppiPermTest |
| printNet | printNet |
| ProCoNA_Data | A simulated mass tag data base |
| proconaNet-class | proconaNet S4 class |
| procona-package | Peptide co-expression network construction. |
| proconaVersionFun | Procona Software Version |
| runningStats | runningStats |
| subsetModCors | subsetModCors |
| subsetPeptideData | subsetPeptideData |
| toPermTest | toPermTest |
| utri | utri |
