API for GreenwoodLab/RVPedigree
Methods for Family-Based Rare-Variant Genetic Association Tests
| Global functions | |
|---|---|
| ASKAT.region | Man page Source code |
| Estim.H0.ASKAT | Man page Source code |
| Estim.H0.NormalizedASKAT | Man page Source code |
| Estim.H0.VCC | Man page Source code |
| Get.G | Man page Source code |
| GetRelMatrix | Man page Source code |
| Neg.LogLikelihood.ASKAT | Source code |
| Neg.LogLikelihood.VC.C1 | Source code |
| Normality.test | Man page Source code |
| NormalizedASKAT.region | Man page Source code |
| Preparation.VCC | Man page Source code |
| Preparation.hap.perm | Man page Source code |
| RVPedigree | Man page Source code |
| RVPedigree-package | Man page |
| VCC1.region | Man page Source code |
| VCC2.region | Man page Source code |
| VCC3.region | Man page Source code |
| check_Ncores | Source code |
| check_VCC3afterVCC1 | Source code |
| check_covariates | Source code |
| check_files | Source code |
| check_method | Source code |
| check_pheno | Source code |
| check_positions | Source code |
| check_regions | Source code |
| check_relmatrix | Source code |
| check_weights | Source code |
| compute.weights | Man page Source code |
| ff | Source code |
| ff.hap | Source code |
| findParentIndices | Source code |
| lettersTo12 | Source code |
| meiose | Source code |
| perm.hap | Man page Source code |
| pvalue.ASKAT | Man page Source code |
| pvalue.NormalizedASKAT | Man page Source code |
| pvalue.VCC1 | Man page Source code |
| pvalue.VCC2 | Man page Source code |
| pvalue.VCC3 | Man page Source code |
| read.haplo | Man page Source code |
| read.haplo.bedfile | Man page Source code |
| read.haplo.pedfile | Man page Source code |
| read.haplo.shapeit_haps | Man page Source code |
| read.pedigree | Man page Source code |
| readMapFile | Man page Source code |
