Files in GreenwoodLab/RVPedigree
Methods for Family-Based Rare-Variant Genetic Association Tests

.Rbuildignore
.travis.yml
DESCRIPTION
NAMESPACE
R/ASKAT.region.R R/Estim.H0.ASKAT.R R/Estim.H0.NormalizedASKAT.R R/Estim.H0.VCC.R R/Get.G.R R/GetRelMatrix.R R/Neg.LogLikelihood.ASKAT.R R/Neg.LogLikelihood.VC.C1.R R/Normality.test.R R/NormalizedASKAT.region.R R/Preparation.VCC.R R/Preparation.hap.perm.R R/RVPedigree-package.R R/RVPedigree.R R/VCC1.region.R R/VCC2.region.R R/VCC3.region.R R/compute.weights.R R/ff.hap.R R/findParentIndices.R R/inputChecks.R R/lettersTo12.R R/meiose.R R/perm.hap.R R/pvalue.ASKAT.R R/pvalue.NormalizedASKAT.R R/pvalue.VCC1.R R/pvalue.VCC2.R R/pvalue.VCC3.R R/read.haplo.R R/read.haplo.bedfile.R R/read.haplo.pedfile.R R/read.haplo.shapeit-haps.R R/read.pedigree.R R/readMapFile.R README.md
build/vignette.rds
inst/CITATION
inst/doc/vignette.R
inst/doc/vignette.Rnw
inst/doc/vignette.pdf
inst/extdata/NNormTrait.dat
inst/extdata/OneFamilyExample.ped
inst/extdata/TwoFamilyExample.ped
inst/extdata/covariates.dat
inst/extdata/covariates2.dat
inst/extdata/data.map
inst/extdata/data.ped
inst/extdata/data.phe
inst/extdata/dataB.bed
inst/extdata/dataB.bim
inst/extdata/dataB.fam
inst/extdata/dataT.tfam
inst/extdata/dataT.tped
inst/extdata/data_nullmorgans.map
inst/extdata/genes.lst
inst/extdata/genes2.lst
inst/extdata/gwaa.data.RData
inst/extdata/kinmat.Rdata
inst/extdata/pheno.dat
inst/extdata/test.bed
inst/extdata/test.bim
inst/extdata/test.fam
inst/extdata/test.map
inst/extdata/test.ped
man/ASKAT.region.Rd man/Estim.H0.ASKAT.Rd man/Estim.H0.NormalizedASKAT.Rd man/Estim.H0.VCC.Rd man/Get.G.Rd man/GetRelMatrix.Rd man/Normality.test.Rd man/NormalizedASKAT.region.Rd man/Preparation.VCC.Rd man/Preparation.hap.perm.Rd man/RVPedigree-package.Rd man/RVPedigree.Rd man/VCC1.region.Rd man/VCC2.region.Rd man/VCC3.region.Rd man/compute.weights.Rd man/perm.hap.Rd man/pvalue.ASKAT.Rd man/pvalue.NormalizedASKAT.Rd man/pvalue.VCC1.Rd man/pvalue.VCC2.Rd man/pvalue.VCC3.Rd man/read.haplo.Rd man/read.haplo.bedfile.Rd man/read.haplo.pedfile.Rd man/read.haplo.shapeit_haps.Rd man/read.pedigree.Rd man/readMapFile.Rd
vignettes/vignette.Rnw
GreenwoodLab/RVPedigree documentation built on May 8, 2017, 12:57 p.m.