bs_filter | R Documentation |
biological sequence filter by searching pattern
bs_filter(x, pattern, by = "description", ignore.case = FALSE)
x |
BStringSet object |
pattern |
keyword for filter |
by |
one of 'description' and 'sequence' |
ignore.case |
logical |
BStringSet object
Guangchuang Yu
fa_file <- system.file("extdata/HA.fas", package="seqmagick")
x <- fa_read(fa_file)
bs_filter(x, 'ATGAAAGTAAAA', by='sequence')
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