fa_filter: fa_filter
In GuangchuangYu/seqmagick: Sequence Manipulation Utilities
fa_filter R Documentation
fa_filter
Description
fasta filter by searching pattern
Usage
fa_filter(
fasfile,
pattern,
by = "description",
ignore.case = FALSE,
outfile = NULL,
type = "interleaved"
)
Arguments
fasfile
input fasta file
pattern
keyword for filter
by
one of 'description' and 'sequence'
ignore.case
logical
outfile
output file
type
one of 'interleaved' and 'sequential'
Value
BStringSet object
Author(s)
Guangchuang Yu
GuangchuangYu/seqmagick documentation built on Feb. 9, 2024, 3:06 a.m.
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| fa_filter | R Documentation |
fa_filter
Description
fasta filter by searching pattern
Usage
fa_filter(
fasfile,
pattern,
by = "description",
ignore.case = FALSE,
outfile = NULL,
type = "interleaved"
)
Arguments
fasfile |
input fasta file |
pattern |
keyword for filter |
by |
one of 'description' and 'sequence' |
ignore.case |
logical |
outfile |
output file |
type |
one of 'interleaved' and 'sequential' |
Value
BStringSet object
Author(s)
Guangchuang Yu
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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