treeio-package: treeio: Base Classes and Functions for Phylogenetic Tree...

In GuangchuangYu/treeio: Base Classes and Functions for Phylogenetic Tree Input and Output

treeio: Base Classes and Functions for Phylogenetic Tree Input and Output

Description

'treeio' is an R package to make it easier to import and store phylogenetic tree with associated data; and to link external data from different sources to phylogeny. It also supports exporting phylogenetic tree with heterogeneous associated data to a single tree file and can be served as a platform for merging tree with associated data and converting file formats.

Author(s)

Maintainer: Guangchuang Yu [e-mail] (ORCID)

Other contributors:

• Tommy Tsan-Yuk Lam [e-mail] [contributor, thesis advisor]

• Shuangbin Xu [e-mail] (ORCID) [contributor]

• Bradley Jones [e-mail] [contributor]

• Casey Dunn [e-mail] [contributor]

• Tyler Bradley [e-mail] [contributor]

• Konstantinos Geles [e-mail] [contributor]

See Also

Useful links:

• https://github.com/YuLab-SMU/treeio (devel)

• https://docs.ropensci.org/treeio/ (docs)

• https://www.amazon.com/Integration-Manipulation-Visualization-Phylogenetic-Computational-ebook/dp/B0B5NLZR1Z/ (book)

• \Sexpr[results=rd]{tools:::Rd_expr_doi("10.1093/molbev/msz240 (paper)")}

• Report bugs at https://github.com/YuLab-SMU/treeio/issues

GuangchuangYu/treeio documentation built on April 12, 2024, 5:25 a.m.