read_blast | R Documentation |
When performing BLAST searches with the blast_*()
functions,
the corresponding BLAST output file can be imported into the current R session using this function.
All output formats given by BLAST are supported (see e.g. description for details).
read_blast(file, out.format, postgres.user = NULL)
file |
path to BLAST output file. |
out.format |
a character string specifying the output format of the BLAST output that shall be imported. Available options are:
|
postgres.user |
specify username for RPostgreSQL connection. |
Hajk-Georg Drost
blast_protein_to_protein
, blast_nucleotide_to_protein
,
blast_nucleotide_to_nucleotide
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