PlinkBedToQualvar: convert plinkbed data to qualvar data frame and return.
In Halvee/rvatk: Rare Variant Analysis Toolkit
Description
convert plinkbed data to qualvar data frame and return.
Usage
1
PlinkBedToQualvar(pb, samples, varinfo, varinfo.class = NULL)
Arguments
pb
plinkbed, a snpMatrix obj courtesy of the snpStats pkg.
samples
a vector of samples to subset on.
varinfo
a data frame in the varinfo format (varID,geneName,varClass).
varinfo.class
variant class to subset on in varinfo data frame.
Halvee/rvatk documentation built on May 6, 2019, 10:55 p.m.
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Description
convert plinkbed data to qualvar data frame and return.
Usage
1 | PlinkBedToQualvar(pb, samples, varinfo, varinfo.class = NULL)
|
Arguments
pb |
plinkbed, a snpMatrix obj courtesy of the snpStats pkg. |
samples |
a vector of samples to subset on. |
varinfo |
a data frame in the varinfo format (varID,geneName,varClass). |
varinfo.class |
variant class to subset on in varinfo data frame. |
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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