updateMergedStates: Update Cohort State Information for Merged States

In HealthInformaticsUT/Cohort2Trajectory: Package for creating patient orientated treatment trajectories from cohorts defined in OHDSI ATLAS

Update Cohort State Information for Merged States

Description

Updates stateCohortLabels, stateCohortPriorityOrder, allowedStatesList, and stateCohortAbsorbing when new merged states are introduced.

Usage

updateMergedStates(
  data,
  stateCohortLabels,
  stateCohortPriorityOrder,
  allowedStatesList,
  stateCohortAbsorbing
)

Arguments

data	A dataframe containing cohort definitions.
stateCohortLabels	A vector of existing state labels.
stateCohortPriorityOrder	A vector defining the priority order of states.
allowedStatesList	A named list of allowed state transitions.
stateCohortAbsorbing	A vector of absorbing states that prevent further transitions.
updateAutomaticallyForMergedStates	A boolean flag to enable automatic updates.

Value

A list containing updated stateCohortLabels, stateCohortPriorityOrder, allowedStatesList, and stateCohortAbsorbing.

HealthInformaticsUT/Cohort2Trajectory documentation built on March 1, 2025, 7:47 p.m.