NMIImp: NMI improvement
In HectorRDB/Dune: Improving replicability in single-cell RNA-Seq cell type discovery

Compute the NMI improvement over the NMI merging procedure

1	NMIImp(merger, unclustered = NULL)

`merger`	the result from having run `Dune` on the dataset
`unclustered`	The value assigned to unclustered cells. Default to `NULL`

a vector with the mean NMI between methods at each merge

NMItrend

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data("clusMat", package = "Dune")
merger <- Dune(clusMat = clusMat)
plot(0:nrow(merger$merges), NMIImp(merger))

HectorRDB/Dune documentation built on Dec. 18, 2020, 8:08 p.m.

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