NMIs: NMI Matrix
In HectorRDB/Dune: Improving replicability in single-cell RNA-Seq cell type discovery
Description
Usage
Arguments
Details
Value
Examples
Description
NMI Matrix
Usage
1
Arguments
clusMat
The clustering matrix with a row per cell and a column per
clustering label type
unclustered
The value assigned to unclustered cells. Default to NULL
Details
In the NMI matrix where each cell i,j is the normalized mutual
information between columns i and j of the original clusMat.
If unclustered is not NULL, the cells which have been assigned to the
unclustered cluster will not be counted towards computing the NMI.
Value
The NMI matrix
Examples
1
2
HectorRDB/Dune documentation built on Dec. 18, 2020, 8:08 p.m.
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Description Usage Arguments Details Value Examples
Description
NMI Matrix
Usage
1 |
Arguments
clusMat |
The clustering matrix with a row per cell and a column per clustering label type |
unclustered |
The value assigned to unclustered cells. Default to |
Details
In the NMI matrix where each cell i,j is the normalized mutual
information between columns i and j of the original clusMat.
If unclustered is not NULL, the cells which have been assigned to the
unclustered cluster will not be counted towards computing the NMI.
Value
The NMI matrix
Examples
1 2 |
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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