Description Usage Arguments Value
View source: R/protein_preparation.R
Get EIC data on specified sequences. This extracts the raw eic values, not the profiled values in class.
1 2 |
dat |
peptide sequences to extract, from makeSequences |
files |
data files to read, or optionally, the objects themselves |
type |
the type of data file, or R object |
times |
the data collection times |
dir |
the directory the files are in |
verbose |
if verbose output desired |
this returns a list of lists, one for each protein, each with a list for each sequence of that protein, each with
ID |
(a single character string) |
Sequence |
(a single character string) |
Times |
|
Elements |
|
data |
data frame with: MZ: the mz, RT: the retention times, Count: matrix with columns for channels and rows for retention times. |
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