| BaseFile |
Man page
|
| BaseFile.appendSection |
Man page
|
| BaseFile.as.character |
Man page
|
| BaseFile.as.list |
Man page
|
| BaseFile.equals |
Man page
|
| BaseFile.getAllDataFiles |
Man page
|
| BaseFile.getSection |
Man page
|
| BaseFile.getSections |
Man page
|
| BaseFile.hasSerialBioAssaySets |
Man page
|
| BaseFile.isSerial |
Man page
|
| BaseFile.length |
Man page
|
| BaseFile.nbrOfSections |
Man page
|
| BaseFile.read |
Man page
|
| BaseFile.removeAllDataFiles |
Man page
|
| BaseFile.removeSection |
Man page
|
| BaseFile.replaceSection |
Man page
|
| BaseFile.seq |
Man page
|
| BaseFile.write |
Man page
|
| BaseFileAssays |
Man page
|
| BaseFileAssays.as.character |
Man page
|
| BaseFileAssays.getAnnotationColumns |
Man page
|
| BaseFileAssays.getCount |
Man page
|
| BaseFileAssays.getDataByIds |
Man page
|
| BaseFileAssays.getId |
Man page
|
| BaseFileAssays.getName |
Man page
|
| BaseFileAssays.getParents |
Man page
|
| BaseFileAssays.nbrOfAssays |
Man page
|
| BaseFileAssays.setAnnotationColumns |
Man page
|
| BaseFileAssays.setCount |
Man page
|
| BaseFileAssays.setData |
Man page
|
| BaseFileAssays.setDataFieldByIds |
Man page
|
| BaseFileAssays.setName |
Man page
|
| BaseFileAssays.setParents |
Man page
|
| BaseFileAssays.validate |
Man page
|
| BaseFileBioassaysetinfo |
Man page
|
| BaseFileBioassaysetinfo.as.character |
Man page
|
| BaseFileBioassaysetinfo.getName |
Man page
|
| BaseFileBioassaysetinfo.validate |
Man page
|
| BaseFileParameters |
Man page
|
| BaseFileParameters.as.character |
Man page
|
| BaseFileParameters.attachParameters |
Man page
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| BaseFileParameters.getParameter |
Man page
|
| BaseFileParameters.getParameters |
Man page
|
| BaseFileParameters.getPluginVersion |
Man page
|
| BaseFileParameters.nbrOfParameters |
Man page
|
| BaseFileSection |
Man page
|
| BaseFileSection.addColumn |
Man page
|
| BaseFileSection.as.character |
Man page
|
| BaseFileSection.as.list |
Man page
|
| BaseFileSection.equals |
Man page
|
| BaseFileSection.getColumns |
Man page
|
| BaseFileSection.getData |
Man page
|
| BaseFileSection.getDataByKeys |
Man page
|
| BaseFileSection.getHeader |
Man page
|
| BaseFileSection.getHeaders |
Man page
|
| BaseFileSection.getType |
Man page
|
| BaseFileSection.hasColumns |
Man page
|
| BaseFileSection.hasData |
Man page
|
| BaseFileSection.hasHeaders |
Man page
|
| BaseFileSection.nbrOfHeaders |
Man page
|
| BaseFileSection.print |
Man page
|
| BaseFileSection.setColumns |
Man page
|
| BaseFileSection.setData |
Man page
|
| BaseFileSection.setDataFieldByKeys |
Man page
|
| BaseFileSection.setHeader |
Man page
|
| BaseFileSection.setType |
Man page
|
| BaseFileSection.sizeOfData |
Man page
|
| BaseFileSection.validate |
Man page
|
| BaseFileSpots |
Man page
|
| BaseFileSpots.as.character |
Man page
|
| BaseFileSpots.getAssayFields |
Man page
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| BaseFileSpots.getAssays |
Man page
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| BaseFileSpots.getColumns |
Man page
|
| BaseFileSpots.getData |
Man page
|
| BaseFileSpots.getDataFiles |
Man page
|
| BaseFileSpots.hasDataFiles |
Man page
|
| BaseFileSpots.nbrOfAssays |
Man page
|
| BaseFileSpots.setAssays |
Man page
|
| BaseFileSpots.setColumns |
Man page
|
| BaseFileSpots.setDataFields |
Man page
|
| BaseFileSpots.setDataFiles |
Man page
|
| BasePlugin |
Man page
|
| BasePluginDispatcher |
Man page
|
| BasePluginDispatcher.buildReports |
Man page
|
| BasePluginDispatcher.main |
Man page
|
| BasePluginDispatcher.patchCode |
Man page
|
| Non-documented objects |
Man page
|
| addColumn |
Man page
|
| addColumn,BaseFileSection-method |
Man page
|
| addColumn.BaseFileSection |
Man page
Man page
|
| addEnumerationParameter |
Man page
|
| addEnumerationParameter.BaseFilePlugin |
Man page
|
| addParameter |
Man page
|
| addParameter.BaseFilePlugin |
Man page
|
| addUsedColumns |
Man page
|
| addUsedColumns.BaseFilePlugin |
Man page
|
| addUsedFields |
Man page
|
| addUsedFields.BaseFilePlugin |
Man page
|
| appendSection |
Man page
|
| appendSection,BaseFile-method |
Man page
|
| appendSection.BaseFile |
Man page
Man page
|
| aroma.Base |
Man page
|
| aroma.Base-package |
Man page
|
| as.character,BaseFile-method |
Man page
|
| as.character,BaseFileAssays-method |
Man page
|
| as.character,BaseFileBioassaysetinfo-method |
Man page
|
| as.character,BaseFileParameters-method |
Man page
|
| as.character,BaseFileSection-method |
Man page
|
| as.character,BaseFileSpots-method |
Man page
|
| as.character.BaseFile |
Man page
Man page
|
| as.character.BaseFileAssays |
Man page
Man page
|
| as.character.BaseFileBioassaysetinfo |
Man page
Man page
|
| as.character.BaseFileParameters |
Man page
Man page
|
| as.character.BaseFileSection |
Man page
Man page
|
| as.character.BaseFileSpots |
Man page
Man page
|
| as.list |
Man page
|
| as.list,BaseFile-method |
Man page
|
| as.list,BaseFileSection-method |
Man page
|
| as.list.BaseFile |
Man page
Man page
|
| as.list.BaseFileSection |
Man page
Man page
|
| attachParameters |
Man page
|
| attachParameters,BaseFileParameters-method |
Man page
|
| attachParameters.BaseFileParameters |
Man page
Man page
|
| buildReports |
Man page
|
| buildReports,BasePluginDispatcher-method |
Man page
|
| buildReports.BasePluginDispatcher |
Man page
Man page
|
| equals |
Man page
|
| equals,BaseFile-method |
Man page
|
| equals,BaseFileSection-method |
Man page
|
| equals.BaseFile |
Man page
Man page
|
| equals.BaseFileSection |
Man page
Man page
|
| extractBaseFileSpotsData |
Man page
|
| extractBaseFileSpotsData.default |
Man page
|
| getAllDataFiles |
Man page
|
| getAllDataFiles,BaseFile-method |
Man page
|
| getAllDataFiles.BaseFile |
Man page
Man page
|
| getAnnotationColumns |
Man page
|
| getAnnotationColumns,BaseFileAssays-method |
Man page
|
| getAnnotationColumns.BaseFileAssays |
Man page
Man page
|
| getAssayFields |
Man page
|
| getAssayFields,BaseFileSpots-method |
Man page
|
| getAssayFields.BaseFileSpots |
Man page
Man page
|
| getAssays |
Man page
|
| getAssays,BaseFileSpots-method |
Man page
|
| getAssays.BaseFileSpots |
Man page
Man page
|
| getBaseFileSections |
Man page
|
| getBaseFileSections.BaseFilePlugin |
Man page
|
| getColumns |
Man page
|
| getColumns,BaseFileSection-method |
Man page
|
| getColumns,BaseFileSpots-method |
Man page
|
| getColumns.BaseFileSection |
Man page
Man page
|
| getColumns.BaseFileSpots |
Man page
Man page
|
| getCount |
Man page
|
| getCount,BaseFileAssays-method |
Man page
|
| getCount.BaseFileAssays |
Man page
Man page
|
| getData |
Man page
|
| getData,BaseFileSection-method |
Man page
|
| getData,BaseFileSpots-method |
Man page
|
| getData.BaseFileSection |
Man page
Man page
|
| getData.BaseFileSpots |
Man page
Man page
|
| getDataByIds |
Man page
|
| getDataByIds,BaseFileAssays-method |
Man page
|
| getDataByIds.BaseFileAssays |
Man page
Man page
|
| getDataByKeys |
Man page
|
| getDataByKeys,BaseFileSection-method |
Man page
|
| getDataByKeys.BaseFileSection |
Man page
Man page
|
| getDataFiles |
Man page
|
| getDataFiles,BaseFileSpots-method |
Man page
|
| getDataFiles.BaseFileSpots |
Man page
Man page
|
| getHeader |
Man page
|
| getHeader,BaseFileSection-method |
Man page
|
| getHeader.BaseFileSection |
Man page
Man page
|
| getHeaders |
Man page
|
| getHeaders,BaseFileSection-method |
Man page
|
| getHeaders.BaseFileSection |
Man page
Man page
|
| getId |
Man page
|
| getId,BaseFileAssays-method |
Man page
|
| getId.BaseFileAssays |
Man page
Man page
|
| getName |
Man page
|
| getName,BaseFileAssays-method |
Man page
|
| getName,BaseFileBioassaysetinfo-method |
Man page
|
| getName.BaseFileAssays |
Man page
Man page
|
| getName.BaseFileBioassaysetinfo |
Man page
Man page
|
| getParameter |
Man page
|
| getParameter,BaseFileParameters-method |
Man page
|
| getParameter.BaseFileParameters |
Man page
Man page
|
| getParameters |
Man page
|
| getParameters,BaseFileParameters-method |
Man page
|
| getParameters.BaseFileParameters |
Man page
Man page
|
| getParents |
Man page
|
| getParents,BaseFileAssays-method |
Man page
|
| getParents.BaseFileAssays |
Man page
Man page
|
| getPluginVersion |
Man page
|
| getPluginVersion,BaseFileParameters-method |
Man page
|
| getPluginVersion.BaseFileParameters |
Man page
Man page
|
| getSection |
Man page
|
| getSection,BaseFile-method |
Man page
|
| getSection.BaseFile |
Man page
Man page
|
| getSections |
Man page
|
| getSections,BaseFile-method |
Man page
|
| getSections.BaseFile |
Man page
Man page
|
| getType |
Man page
|
| getType,BaseFileSection-method |
Man page
|
| getType.BaseFileSection |
Man page
Man page
|
| hasColumns |
Man page
|
| hasColumns,BaseFileSection-method |
Man page
|
| hasColumns.BaseFileSection |
Man page
Man page
|
| hasData |
Man page
|
| hasData,BaseFileSection-method |
Man page
|
| hasData.BaseFileSection |
Man page
Man page
|
| hasDataFiles |
Man page
|
| hasDataFiles,BaseFileSpots-method |
Man page
|
| hasDataFiles.BaseFileSpots |
Man page
Man page
|
| hasHeaders |
Man page
|
| hasHeaders,BaseFileSection-method |
Man page
|
| hasHeaders.BaseFileSection |
Man page
Man page
|
| hasSerialBioAssaySets |
Man page
|
| hasSerialBioAssaySets,BaseFile-method |
Man page
|
| hasSerialBioAssaySets.BaseFile |
Man page
Man page
|
| isSerial |
Man page
|
| isSerial,BaseFile-method |
Man page
|
| isSerial.BaseFile |
Man page
Man page
|
| length,BaseFile-method |
Man page
|
| length.BaseFile |
Man page
|
| main |
Man page
|
| main,BasePluginDispatcher-method |
Man page
|
| main.BasePluginDispatcher |
Man page
Man page
|
| nbrOfAssays |
Man page
|
| nbrOfAssays,BaseFileAssays-method |
Man page
|
| nbrOfAssays,BaseFileSpots-method |
Man page
|
| nbrOfAssays.BaseFileAssays |
Man page
Man page
|
| nbrOfAssays.BaseFileSpots |
Man page
Man page
|
| nbrOfHeaders |
Man page
|
| nbrOfHeaders,BaseFileSection-method |
Man page
|
| nbrOfHeaders.BaseFileSection |
Man page
Man page
|
| nbrOfParameters |
Man page
|
| nbrOfParameters,BaseFileParameters-method |
Man page
|
| nbrOfParameters.BaseFileParameters |
Man page
Man page
|
| nbrOfParameters.BaseFilePlugin |
Man page
|
| nbrOfSections |
Man page
|
| nbrOfSections,BaseFile-method |
Man page
|
| nbrOfSections.BaseFile |
Man page
Man page
|
| patchCode,BasePluginDispatcher-method |
Man page
|
| patchCode.BasePluginDispatcher |
Man page
Man page
|
| print |
Man page
|
| print,BaseFileSection-method |
Man page
|
| print.BaseFileSection |
Man page
Man page
|
| read |
Man page
|
| read,BaseFile-method |
Man page
|
| read.BaseFile |
Man page
Man page
|
| readBaseFile |
Man page
|
| readBaseFile.default |
Man page
|
| readBaseFileSection |
Man page
|
| readBaseFileSection.default |
Man page
|
| removeAllDataFiles |
Man page
|
| removeAllDataFiles,BaseFile-method |
Man page
|
| removeAllDataFiles.BaseFile |
Man page
Man page
|
| removeSection |
Man page
|
| removeSection,BaseFile-method |
Man page
|
| removeSection.BaseFile |
Man page
Man page
|
| replaceSection |
Man page
|
| replaceSection,BaseFile-method |
Man page
|
| replaceSection.BaseFile |
Man page
Man page
|
| seq,BaseFile-method |
Man page
|
| seq.BaseFile |
Man page
Man page
|
| setAnnotationColumns |
Man page
|
| setAnnotationColumns,BaseFileAssays-method |
Man page
|
| setAnnotationColumns.BaseFileAssays |
Man page
Man page
|
| setAssays |
Man page
|
| setAssays,BaseFileSpots-method |
Man page
|
| setAssays.BaseFileSpots |
Man page
Man page
|
| setColumns |
Man page
|
| setColumns,BaseFileSection-method |
Man page
|
| setColumns,BaseFileSpots-method |
Man page
|
| setColumns.BaseFileSection |
Man page
Man page
|
| setColumns.BaseFileSpots |
Man page
Man page
|
| setCount |
Man page
|
| setCount,BaseFileAssays-method |
Man page
|
| setCount.BaseFileAssays |
Man page
Man page
|
| setData |
Man page
|
| setData,BaseFileAssays-method |
Man page
|
| setData,BaseFileSection-method |
Man page
|
| setData.BaseFileAssays |
Man page
Man page
|
| setData.BaseFileSection |
Man page
Man page
|
| setDataFieldByIds |
Man page
|
| setDataFieldByIds,BaseFileAssays-method |
Man page
|
| setDataFieldByIds.BaseFileAssays |
Man page
Man page
|
| setDataFieldByKeys |
Man page
|
| setDataFieldByKeys,BaseFileSection-method |
Man page
|
| setDataFieldByKeys.BaseFileSection |
Man page
Man page
|
| setDataFields |
Man page
|
| setDataFields,BaseFileSpots-method |
Man page
|
| setDataFields.BaseFileSpots |
Man page
Man page
|
| setDataFiles |
Man page
|
| setDataFiles,BaseFileSpots-method |
Man page
|
| setDataFiles.BaseFileSpots |
Man page
Man page
|
| setDescription |
Man page
|
| setDescription.BaseFilePlugin |
Man page
|
| setExecName |
Man page
|
| setExecName.BaseFilePlugin |
Man page
|
| setGeneAverages |
Man page
|
| setGeneAverages.BaseFilePlugin |
Man page
|
| setHeader |
Man page
|
| setHeader,BaseFileSection-method |
Man page
|
| setHeader.BaseFileSection |
Man page
Man page
|
| setMinChannels |
Man page
|
| setMinChannels.BaseFilePlugin |
Man page
|
| setName |
Man page
|
| setName,BaseFileAssays-method |
Man page
|
| setName.BaseFileAssays |
Man page
Man page
|
| setParents |
Man page
|
| setParents,BaseFileAssays-method |
Man page
|
| setParents.BaseFileAssays |
Man page
Man page
|
| setSerialFormat |
Man page
|
| setSerialFormat.BaseFilePlugin |
Man page
|
| setType |
Man page
|
| setType,BaseFileSection-method |
Man page
|
| setType.BaseFileSection |
Man page
Man page
|
| setUrl |
Man page
|
| setUrl.BaseFilePlugin |
Man page
|
| setUsedColumns |
Man page
|
| setUsedColumns.BaseFilePlugin |
Man page
|
| setUsedFields |
Man page
|
| setUsedFields.BaseFilePlugin |
Man page
|
| setVersion |
Man page
|
| setVersion.BaseFilePlugin |
Man page
|
| sizeOfData |
Man page
|
| sizeOfData,BaseFileSection-method |
Man page
|
| sizeOfData.BaseFileSection |
Man page
Man page
|
| validate |
Man page
|
| validate,BaseFileAssays-method |
Man page
|
| validate,BaseFileBioassaysetinfo-method |
Man page
|
| validate,BaseFileSection-method |
Man page
|
| validate.BaseFileAssays |
Man page
Man page
|
| validate.BaseFileBioassaysetinfo |
Man page
Man page
|
| validate.BaseFileSection |
Man page
Man page
|
| write |
Man page
|
| write,BaseFile-method |
Man page
|
| write.BaseFile |
Man page
Man page
|
| write.default |
Man page
|
| writeBaseFile |
Man page
|
| writeBaseFile.default |
Man page
|
| writeBaseFileSection |
Man page
|
| writeBaseFileSection.default |
Man page
|
