BaseFileSection: The BaseFileSection class

In HenrikBengtsson/aroma.Base: A generic R plugin dispatcher for BASE

Description

Package: aroma.Base
Class BaseFileSection

Object
~~|
~~+--BaseFileSection

Directly known subclasses:
BaseFileAssays, BaseFileBioassaysetinfo, BaseFileParameters, BaseFileSpots

public static class BaseFileSection
extends Object

Usage

BaseFileSection(section=NULL, type=NULL, ...)

Arguments

section	A list structure.
type	A character string specifying the type of section.
...	Not used.

Fields and Methods

Methods:

	addColumn	Adds a column to the other column names.
	as.character	Gets a string description of object.
	as.list	Gets a list representation of object.
	equals	Checks if a BASE file section equals another.
	getColumns	Gets the column names of the data table.
	getData	Gets all or a subset of data of a BASE file section.
	getDataByKeys	Gets a subset of data for one or all bioassays in the bioassay set.
	getHeader	Gets one header of a BASE section.
	getHeaders	Gets the headers of a BASE section.
	getType	Gets the type of a BASE section.
	hasColumns	Checks if certain columns exists or not.
	hasData	Checks if section has a data table.
	hasHeaders	Checks if specified headers exists in a BASE section.
	nbrOfHeaders	Gets the number of headers in a BASE section.
	print	Prints a BASE file section to stdout.
	setColumns	Sets the column names of the data table.
	setData	Sets data of a BASE file section.
	setDataFieldByKeys	Sets a data field by another key field.
	setHeader	Sets a header of a BASE section.
	setType	Sets the type of a BASE section.
	sizeOfData	Gets the dimension of the data table.
	validate	Validates BASE file section.

Methods inherited from Object:
$, $<-, [[, [[<-, as.character, attach, attachLocally, clearCache, clone, detach, equals, extend, finalize, gc, getEnvironment, getFields, getInstantiationTime, getStaticInstance, hasField, hashCode, ll, load, objectSize, print, registerFinalizer, save

Author(s)

Henrik Bengtsson (http://www.braju.com/R/)

See Also

BaseFile.

HenrikBengtsson/aroma.Base documentation built on May 7, 2019, 1:51 a.m.