as.MAData.RGData: Transform from the red and green intensities into log ratios...

In HenrikBengtsson/aroma: An R Object-oriented Microarray Analysis package

Description

Transform from the red and green intensities into log ratios between them and the log product of them.

Usage

## S3 method for class 'RGData'
as.MAData(this, slides=NULL, ...)

Arguments

slides

A vector of integers indicating which slides to transformed. If NULL, all slides are transformed.

Value

Returns a MAData object.

Author(s)

Henrik Bengtsson (http://www.braju.com/R/)

See Also

MAData.as.RGData. For more information see RGData.

Examples

  SMA$loadData(c("mouse.data", "mouse.setup"))
  raw <- RawData(mouse.data, layout=as.Layout(mouse.setup))
  rg <- getSignal(raw)
  ma <- as.MAData(rg)

HenrikBengtsson/aroma documentation built on May 7, 2019, 12:56 a.m.