epiRomics_build_dB: Build epiRomics database

In Huising-Lab/epiRomics: Epigenomic Analysis Package Built for R (epiRomics)

Build epiRomics database

Description

Build epiRomics database

Usage

epiRomics_build_dB(
  epiRomics_db_file,
  txdb_organism,
  epiRomics_genome,
  epiRomics_organism
)

Arguments

epiRomics_db_file	character string of path to properly formatted csv file containing epigenetic data. [See vignette for more details]
txdb_organism	a character string containing the TxDB associated with your data.
epiRomics_genome	a character string containing the genome associated with your data. e.g. "mm10" or "hg19".
epiRomics_organism	a character string containing the org.db associated with your data.

Value

Variable of class epiRomics for further downstream analysis

Huising-Lab/epiRomics documentation built on Nov. 21, 2023, 5:55 a.m.