epiRomics_enhancers: Identifies putative enhancer regions utilizing select histone...

In Huising-Lab/epiRomics: Epigenomic Analysis Package Built for R (epiRomics)

Identifies putative enhancer regions utilizing select histone marks

Description

Identifies putative enhancer regions utilizing select histone marks

Usage

epiRomics_enhancers(
  epiRomics_dB,
  epiRomics_histone_mark_1 = "h3k4me1",
  epiRomics_histone_mark_2 = "h3k27ac"
)

Arguments

epiRomics_dB	epiRomics class database containing all data initially loaded
epiRomics_histone_mark_1	name of first histone mark, must match name in epiROmics_dB@meta, default set to h3k4me1
epiRomics_histone_mark_2	name of second histone mark, must match name in epiROmics_dB@meta default set to h3k27ac

Value

Variable of class epiRomics further exploring candidate enhancer regions identified after histone integration

Huising-Lab/epiRomics documentation built on Nov. 21, 2023, 5:55 a.m.