epiRomics_enhancers_filter: Filters putative enhancers called by epiRomics_enhancers by...

In Huising-Lab/epiRomics: Epigenomic Analysis Package Built for R (epiRomics)

Filters putative enhancers called by epiRomics_enhancers by crossing against curated FANTOM data

Description

Filters putative enhancers called by epiRomics_enhancers by crossing against curated FANTOM data

Usage

epiRomics_enhancers_filter(
  epiRomics_putative_enhancers,
  epiRomics_dB,
  epiRomics_type = "mm10_custom_fantom"
)

Arguments

epiRomics_putative_enhancers	epiRomics class database containing putative enhancer calls
epiRomics_dB	epiRomics class database containing all data initially loaded
epiRomics_type	epiRomics reference containing database to validate putative enhancers against

Value

Variable of class epiRomics with filtered candidate enhancer regions

Huising-Lab/epiRomics documentation built on Nov. 21, 2023, 5:55 a.m.