plot_TS_raw: Plot raw phenotypic time series data
In ICRISAT-GEMS/SpaTemHTP: Processing and utilization of HTP data

Description Usage Arguments Value Author(s) Examples

Plot raw phenotypic time series data

1	plot_TS_raw(data_TS, geno_id, rep_av = TRUE, main = "TS")

`data_TS`	`numeric` `matrix` of dimension (N_genotype x N_rep) x N_days containing the phenotype information. the different columns represent the different time points (e.g. days, hours) of measurement.
`geno_id`	`character` vector representing the genotype indicator eventually replicated a number of time.
`rep_av`	`Logical` value indicating if the value should be averaged over replicates of no. Default = TRUE.
`main`	`Character` string representing the title of the graph. Default = 'TS'.

Plot of the G-BLUEs time series. The optional trend will be ploted in red. The heritability will be ploted in dashed blue and time window limits in black.

Vincent Garin

data(SG_PH_data)
data_TS <- SG_PH_data[, 6:28]
geno_id <- SG_PH_data$genotype

plot_TS_raw(data_TS, geno_id, rep_av = FALSE)

plot_TS_raw(data_TS, geno_id, rep_av = TRUE,
main = 'TS averaged over replicates')