API for IDEELResearch/vcfR2manip
Basic functions for manipulating VCFs within the VCFR object/R environment
| Global functions | |
|---|---|
| EB_for_wsaf | Man page Source code |
| GFF2VariantAnnotation_Short | Man page Source code |
| NRAFdf2Fw_pairwisegendist | Man page |
| binomial_draw_gtmat012_imputation | Man page Source code |
| bivcfR2segsites_wsaf | Man page |
| calc_loci_missingness_by_smpl | Man page Source code |
| corMat | Man page Source code |
| dab | Source code |
| genautocorr | Man page Source code |
| gtmat012 | Man page |
| plot_vcfRobj_GT | Man page Source code |
| select_samples | Man page Source code |
| vcfR2Fw_pairwisegendist | Man page |
| vcfR2LDfiltered | Man page Source code |
| vcfR2SubsetChrom | Man page Source code |
| vcfR2SubsetChromPos | Man page |
| vcfR2nohetsmonoclonal_gt | Man page |
| vcfR2removepoorcovloci_dp | Man page Source code |
| vcfR2removesingletons_gt | Man page |
| vcfR2segsites_gt | Man page |
| vcfR2thap | Man page Source code |
| vcf_loci_splitter | Man page |
| vcffilter_ChromPos | Man page |
| vcffilter_format | Man page Source code |
| vcffilter_info | Man page Source code |
| wicalc | Man page Source code |
