Files in IDEELResearch/vcfR2manip
Basic functions for manipulating VCFs within the VCFR object/R environment

.Rbuildignore

.gitignore

DESCRIPTION

LICENSE

NAMESPACE

R/INFO_Format_filt.R R/LD_filt.R R/annot_vcf_from_gff.R R/dab_genet_dist.R R/loci_imputation_approaches.R R/misc_filt.R R/rehh.R R/sample_loci_selection.R R/vcf_viz.R README.md

codecov.yml

man/EB_for_wsaf.Rd man/GFF2VariantAnnotation_Short.Rd man/NRAFdf2Fw_pairwisegendist.Rd man/binomial_draw_gtmat012_imputation.Rd man/bivcfR2segsites_wsaf.Rd man/calc_loci_missingness_by_smpl.Rd man/corMat.Rd man/genautocorr.Rd man/gtmat012.Rd man/plot_vcfRobj_GT.Rd man/select_samples.Rd man/vcfR2Fw_pairwisegendist.Rd man/vcfR2LDfiltered.Rd man/vcfR2SubsetChrom.Rd man/vcfR2SubsetChromPos.Rd man/vcfR2nohetsmonoclonal_gt.Rd man/vcfR2removepoorcovloci_dp.Rd man/vcfR2removesingletons_gt.Rd man/vcfR2segsites_gt.Rd man/vcfR2thap.Rd man/vcf_loci_splitter.Rd man/vcffilter_ChromPos.Rd man/vcffilter_format.Rd man/vcffilter_info.Rd man/wicalc.Rd sandbox/devo.R

vcfRmanip.Rproj

IDEELResearch/vcfR2manip documentation built on Nov. 16, 2020, 3:51 a.m.

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