vcfR2LDfiltered: vcfR2LDfiltered

Description Usage Arguments

View source: R/LD_filt.R

Description

Filtering an object of class vcfR for linkage disequilibrium via genetic autocorrelation.

Usage

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vcfR2LDfiltered(
  vcffile = NULL,
  vcfR = NULL,
  genautocorrresult = NULL,
  threshDist = 1000,
  biallelicsnps = TRUE
)

Arguments

vcffile

A variant call file (vcf) path. This VCF will be converted to an object of class vcfR.


IDEELResearch/vcfRmanip documentation built on Nov. 17, 2020, 9:32 p.m.