IDEELResearch/vcfRmanip
Basic functions for manipulating VCFs within the VCFR object/R environment

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vcffilter_format: vcfR2vcffilter_FORMAT

vcffilter_format: vcfR2vcffilter_FORMAT
In IDEELResearch/vcfRmanip: Basic functions for manipulating VCFs within the VCFR object/R environment

Description Usage Arguments

View source: R/INFO_Format_filt.R

Description

vcfR2vcffilter_FORMAT

Usage

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vcffilter_format(
  vcfRobject = NULL,
  formatGQ = NULL,
  formatDP = NULL,
  formatSP = NULL,
  prop.loci.missing = NULL,
  biallelic = TRUE,
  SNPs = TRUE
)

Arguments

prop.loci.missing

Given a loci, how many samples can have missing information before that loci is dropped


IDEELResearch/vcfRmanip documentation built on Nov. 17, 2020, 9:32 p.m.

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