read_count_per_condition: Sum the read counts for every sample by condition

In INRAE-LPGP/prostPostprocess: Provide utility fonction to postprocess prost! output

Sum the read counts for every sample by condition

Description

The condition is from the conditions column in sample_info

Usage

read_count_per_condition(
  compressed_by_annotation,
  sample_info,
  condition_list = "conditions",
  normalized = F
)

Arguments

compressed_by_annotation	compressed_by_annotation tibble
sample_info	sample_info tibble
condition_list	a string vector describing the different conditions
normalized	whether to use raw or normalized from prost, default raw

Value

a tibble with a line by condition and a column by annotated miRNA

INRAE-LPGP/prostPostprocess documentation built on April 14, 2023, 12:59 p.m.