Man pages for InouyeLab/NetRep
Permutation Testing Network Module Preservation Across Datasets
| bigMatrix | Load a 'bigMatrix' (deprecated) |
| combineAnalyses | Combine results of multiple permutation procedures |
| common_params | Template parameters |
| disk.matrix | The 'disk.matrix' class |
| example-data | Example data |
| modulePreservation | Replication and preservation of network modules across... |
| NetRep | Fast permutation procedure for testing network module... |
| networkProperties | Calculate the topological properties for a network module |
| nodeOrder | Order nodes in descending order of _weighted degree_ and... |
| orderModules_param | Template parameters |
| permutationTest | Permutation test P-values for module preservation statistics |
| plotModule | Plot the topology of a network module |
| plot_params | Template parameters |
| plotTopology | Plot a topological feature of network module |
| requiredPerms | How many permutations do I need to test at my desired... |
| sampleOrder | Order samples within a network. |
| simplify_param | Template parameters |
