SourceTaxaKeyer: Unique taxa by lifestage combinations present in each source...

In InteragencyEcologicalProgram/zooper: Download and Integrate Zooplankton Datasets from the Upper San Francisco Estuary

Unique taxa by lifestage combinations present in each source and size class

Description

Computes a dataframe with all unique taxa by lifestage combinations present in each source and size class

Usage

SourceTaxaKeyer(Data, Crosswalk)

Arguments

Data	Zooplankton dataset. Must have a column named Source with the names of the source datasets and a column named SizeClass with the names of the zooplankton size classes.
Crosswalk	Crosswalk table (e.g., crosswalk) with columns named "Phylum", "Class", "Order", "Family", "Genus", "Taxname", "Lifestage", and column names corresponding to each unique value of paste(data$Source, data$SizeClass, sep="_").

Value

a tibble with the complete taxonomic information for each combination of source and size class.

Author(s)

Sam Bashevkin

See Also

Zoopsynther, crosswalk, zoopComb

Examples

SourceTaxaKey <- SourceTaxaKeyer(Data = dplyr::filter(zoopComb, Source!="YBFMP"),
Crosswalk = crosswalk)

InteragencyEcologicalProgram/zooper documentation built on Feb. 6, 2025, 9:01 a.m.