crosswalk: Taxonomic crosswalk among datasets

In InteragencyEcologicalProgram/zooper: Download and Integrate Zooplankton Datasets from the Upper San Francisco Estuary

Taxonomic crosswalk among datasets

Description

A crosswalk table relating the taxonomic code used by each dataset to current scientific names, life stages, and taxonomic hierarchies.

Usage

crosswalk

Format

a tibble with 404 rows and 34 variables

EMP_Micro

Taxonomic codes used in the Environmental Monitoring Program microzooplankton (43 \mum) mesh dataset

EMP_Meso

Taxonomic codes used in the Environmental Monitoring Program mesozooplankton (160 \mum) mesh dataset

EMP_Macro

Taxonomic codes used in the Environmental Monitoring Program macrozooplankton (505 \mum mesh) dataset

STN_Meso

Taxonomic codes used in the Townet Survey mesozooplankton (160 \mum mesh) dataset

STN_Macro

Taxonomic codes used in the Townet Survey macrozooplankton (505 \mum mesh) dataset

FMWT_Meso

Taxonomic codes used in the Fall Midwater Trawl mesozooplankton (160 \mum mesh) dataset

FMWT_Macro

Taxonomic codes used in the Fall Midwater Trawl macrozooplankton (505 \mum mesh) dataset

twentymm_Meso

Taxonomic codes used in the 20mm Survey mesozooplankton (160 \mum mesh) dataset

FRP_Meso

Taxonomic codes used in the Fish Restoration Program mesozooplankton (150 \mum mesh) dataset

FRP_Macro

Taxonomic codes used in the Fish Restoration Program macrozooplankton (500 \mum mesh) dataset

DOP_Meso

Taxonomic codes used in the Directed Outflow Project mesozooplankton (150 \mum mesh) dataset

DOP_Macro

Taxonomic codes used in the Directed Outflow Project macrozooplankton (500 \mum mesh) dataset

YBFMP

Taxonomic codes used in the Yolo Bypass Fish Monitoring Program zooplankton dataset)

Lifestage

Plankton lifestage

Taxname

Current scientific name

Level

Taxonomic level of the taxa

Phylum

Phylum

Class

Class

Order

Order

Family

Family

Genus

Genus

Species

Species

Intro

Introduction year for non-native species

EMPstart

First year the Environmental Monitoring Program starting counting this taxa

EMPend

Last year the Environmental Monitoring Program counted this taxa

FMWTstart

First year the Fall Midwater Trawl starting counting this taxa

FMWTend

Last year the Fall Midwater Trawl counted this taxa

twentymmstart

First year the 20mm Survey starting counting this taxa

twentymmend

Last year the 20mm Survey counted this taxa

twentymmstart2

First year the 20mm Survey restarted counting this taxa

DOPstart

First year DOP starting counting this taxa

DOPend

Last year DOP counted this taxa

See Also

Zoopdownloader, Zoopsynther, zooper

InteragencyEcologicalProgram/zooper documentation built on Feb. 6, 2025, 9:01 a.m.