R/data.R

In JEFworks/HoneyBADGER: HMM-integrated Bayesian approach for detecting CNV and LOH events using single-cell RNA-seq data

#' Gene expression for cells from MGH31 from Patel et al.
#' 
#' @source \url{https://www.ncbi.nlm.nih.gov/pubmed/24925914}
"gexp"


#' Gene expression reference using normal cells from MGH31 from Patel et al.
#' 
#' @source \url{https://www.ncbi.nlm.nih.gov/pubmed/24925914}
"ref"

#' Alternative allele count for putative heterozygous variants inferred from the ExAC database
#' for cells from MGH31 from Patel. et al.
#' 
#' @source \url{https://www.ncbi.nlm.nih.gov/pubmed/24925914}
"r"

#' Coverage for putative heterozygous variants inferred from the ExAC database
#' for cells from MGH31 from Patel. et al.
#' 
#' @source \url{https://www.ncbi.nlm.nih.gov/pubmed/24925914}
"cov.sc"