escoSimGroupCellMeans: Simulate group cell means

Description Usage Arguments Value

View source: R/esco-simulate.R

Description

Simulate a gene by cell matrix giving the mean expression for each gene in each cell where cells are of discrete group structure. For a cell we start with the base gene mean and then combined with the DE factor for the group/branch they belong to (when simulating group/tree) if the gene is DE gene, finally the means are adjusted for each cell's expected library size.

Usage

1
escoSimGroupCellMeans(sim, verbose)

Arguments

sim

SingleCellExperiment to add cell means to.

verbose

whether to print the process or not.

Value

SingleCellExperiment with added cell means.


JINJINT/ESCO documentation built on May 13, 2021, 7:25 p.m.