csv_to_spike: Get spikes from .csv file of raw data.

In JPNotts/Package: Simulate Spike Sequences

Description

Get spikes from .csv file of raw data.

Usage

csv_to_spike(
  filename,
  time.step = 2,
  transients = 2000,
  spike.occur = 0.6,
  closeness = 40,
  rm.trend = TRUE
)

Arguments

filename	path to the csv file .
time.step	Vector of time from the time series data, or if step size is regular the time step of the experiment.
transients	transient periods where we want to remove spikes.
spike.occur	threshold where we record spikes.
closeness	Value which if two spikes are within this distance they are merged.
rm.trend	Flag, where if TRUE we remove linear trends.

Value

data frame containing spike sequences as columns.

JPNotts/Package documentation built on Oct. 5, 2021, 2:04 p.m.