data_to_spike: Get spikes from raw data

In JPNotts/Package: Simulate Spike Sequences

Description

Get spikes from raw data

Usage

data_to_spike(
  data,
  transients = 2000,
  time.step = 2,
  spike.occur = 0.6,
  val.change = NULL,
  reset = spike.occur,
  closeness = 40,
  rm.trend = TRUE
)

Arguments

data	time series data.
transients	transient periods where we want to remove spikes.
time.step	Vector of time from the time series data, or if step size is regular the time step of the experiment.
spike.occur	threshold where we record spikes.
val.change	vector of times where the threshold value changes.
reset	concentration at which we say a spike is over, default is set to spike.occur.
closeness	Value which if two spikes are within this distance they are merged.
rm.trend	Flag, where if TRUE we remove linear trends.

Value

spike sequence

JPNotts/Package documentation built on Oct. 5, 2021, 2:04 p.m.