get_spikes_app: Get spikes for the shiny app.
In JPNotts/Package: Simulate Spike Sequences

Get spikes for the shiny app.

get_spikes_app(
  data,
  time.step,
  thres,
  lin.trend,
  trans2_low,
  trans2_high,
  trans1,
  trans3,
  closeness
)

`data`	time series data.
`time.step`	Vector of time from the time series data, or if step size is regular the time step of the experiment.
`thres`	Threshold values in form c(spike.occur, val.change)
`lin.trend`	Flag, where if TRUE we remove linear trends.
`trans2_low`	lower bound of second transient period
`trans2_high`	upper bound of secont transient period
`trans1`	first transient period from 0 to trans1.
`trans3`	lower bound of third transient period , where the upper bound is T, the end of experiment time.
`closeness`	Value which if two spikes are within this distance they are merged.