Man pages for JRC-COMBINE/FORESEE
A Tool for the Systematic Comparison of Translational Drug Response Modeling Pipelines
| BlackBoxFilter | Train a Black Box Model for Drug Efficacy Prediction |
| CellorPatient | Test if the Object is a Cell or a Patient Based on the Drug... |
| CellResponseProcessor | Transform Drug Response Data |
| CellResponseTypeAvailabilityCheck | Checking CellResponseType Availability |
| DuplicationHandler | Remove Duplicated Gene Names from a FORESEE Object |
| FeatureCombiner | FeatureCombiner |
| FeaturePreprocessor | Preprocess the Gene Expression Inputs of both TrainObject and... |
| FeatureSelector | Select the Genes that are used as Model Features |
| Foreseer | Apply the trained ForeseeModel on a TestObject |
| ForeseeTest | Test a Drug Efficacy Prediction Model on a TestObject |
| ForeseeTrain | Train a Drug Efficacy Prediction Model |
| GetCellResponseData | Get Cell Line Drug Response from FORESEE Object |
| Homogenizer | Homogenize a Pair of two FORESEE Objects |
| listCellLines | List All Cell lines Inside a ForeseeTrain Object |
| listDrugs | List All Drugs Inside a ForeseeTrain Object |
| listInputOptions | List Input Options for FORESEE Methods |
| requireForesee | Loading/Attaching (and Installing) a Package |
| SampleSelector | SampleSelector |
| Validator | Validate the Performance of a ForeseeModel on a new... |
