get_growth_fit_for_plot: Growth fit for plotting 'get_growth_fit_for_plot' computes a...
In JSHuisman/conjugator: Estimate Plasmid Conjugation Rates

Growth fit for plotting get_growth_fit_for_plot computes a vector of the fit of the growth data, for comparison against the OD data.

get_growth_fit_for_plot(
  OD_data,
  t_col = "time",
  growth_fit,
  blank_tf = T,
  verbose = T
)

`OD_data`	Dataframe of OD data. Expects a column for the time (t_col), and will interpret all other columns as OD data for different samples (identified by their column name).
`t_col`	Name of the time column (defaults to 'time').
`growth_fit`	Output of estimate_growth_rate for the OD_data; requires columns name, carrying_cap, growth_rate, N0, t_min, t_stat
`blank_tf`	Boolean. Should a blank value be subtracted?
`verbose`	Boolean. Should warnings be returned?

Simulated log growth matching the input fits.

Other growth rate functions: .logist(), estimate_growth_rate()

1 2	growth_fit <- estimate_growth_rate(growth_example, t_start = 1, t_col = 'Time_h') get_growth_fit_for_plot(growth_example, t_col = 'Time_h', growth_fit)