API for JanEngelstaedter/cophy
Constructing random cophylogenetic trees and analysing their statistics

Global functions
add_branchSurvival Source code
convert_HBranchesToPhylo Source code
convert_HPCophyloToBranches Source code
convert_HPhyloToBranches Source code
convert_PBranchesToPhylo Source code
cophylogeny Man page Source code
decimal_places Source code
get_GDist Man page Source code
get_PEventsThroughTime Man page Source code
get_PHDistCorrelation Man page Source code
get_PHDistSubtreeCorrelation Man page Source code
get_PextinctionTime Man page Source code
get_branchNThroughTime Man page Source code
get_hostShifts Man page Source code
get_infectionFrequencies Man page Source code
get_infectionFrequenciesSubtrees Man page Source code
get_infectionStatistics Man page Source code
get_tBirth Source code
is_alive Source code
plot.cophylogeny Man page Source code
print.cophylogeny Man page Source code
prune_cophylo Man page Source code
prune_hostTree Source code
prune_parasiteTree Source code
rcophylo Man page Source code
rcophylo_HP Man page Source code
rcophylo_HresP Man page Source code
rcophylo_PonH Man page Source code
rphylo_H Man page Source code
JanEngelstaedter/cophy documentation built on Nov. 7, 2023, 9:37 a.m.