get_PHDistSubtreeCorrelation: Correlation between pairwise distances of associated hosts...
In JanEngelstaedter/cophy: Constructing random cophylogenetic trees and analysing their statistics
get_PHDistSubtreeCorrelation R Documentation
Correlation between pairwise distances of associated hosts and parasites by
host subtree.
Description
Calculating the correlation between the distance matrixes of parasites and
their associated hosts within subtrees specified by particular height.
Requires at least three living parasites.
Usage
get_PHDistSubtreeCorrelation(cophy, h = NULL, k = NULL)
Arguments
cophy
a cophylogeny (object of class "cophylogeny") containing one
host and one parasite tree.
h
numeric scalar or vector with heights where the tree should be cut.
k
an integer scalar or vector with the desired number of groups
JanEngelstaedter/cophy documentation built on Nov. 7, 2023, 9:37 a.m.
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| get_PHDistSubtreeCorrelation | R Documentation |
Correlation between pairwise distances of associated hosts and parasites by host subtree.
Description
Calculating the correlation between the distance matrixes of parasites and their associated hosts within subtrees specified by particular height. Requires at least three living parasites.
Usage
get_PHDistSubtreeCorrelation(cophy, h = NULL, k = NULL)
Arguments
cophy |
a cophylogeny (object of class "cophylogeny") containing one host and one parasite tree. |
h |
numeric scalar or vector with heights where the tree should be cut. |
k |
an integer scalar or vector with the desired number of groups |
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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