indicate_mir: Indicate if a miRNA name is contained in an abstract

In JulFriedrich/miRetrieve: miRNA Text Mining in Abstracts

Description

Indicate if a miRNA name is contained in an abstract with "Yes"/"No".

Usage

indicate_mir(df, indicate.mir, col.mir = miRNA)

Arguments

df	Data frame containing miRNA names.
indicate.mir	Character vector. Vector containing miRNA names to indicate.
col.mir	Symbol. Column containing miRNA names.

Details

Indicate if a miRNA name is contained in an abstract with "Yes"/"No". This requires miRNA names already to be extracted, e.g. with extract_mir_df(), and to be stored in a separate column, specified by col.mir. indicate_mir() adds another column to a data frame which bears the name of the miRNA(s) of interest. Within this column, a "Yes" or "No" specifies if this miRNA name is contained in the corresponding abstract.

Value

Data frame with as many columns added as miRNA names given in indicate.mir. Per column, a "Yes" or "No" indicates if the miRNA name of interest is present in the corresponding abstract.

See Also

extract_mir_df(), indicate_term()

Other indicate functions: indicate_term()

JulFriedrich/miRetrieve documentation built on Sept. 20, 2021, 11:37 p.m.