plot_mir_development: Plot development of miRNA name mentioning over time

In JulFriedrich/miRetrieve: miRNA Text Mining in Abstracts

Description

Plot development of miRNA name mentioning over time.

Usage

plot_mir_development(
  df,
  mir,
  start = NULL,
  end = NULL,
  linetype = "miRNA",
  alpha = 0.8,
  width = 0.3,
  col.mir = miRNA,
  col.year = Year,
  title = NULL
)

Arguments

df	Data frame containing miRNA names and publication years.
mir	Character vector. Vector containing miRNA names to plot.
start	Numeric. Optional. Specifies start year. If start = NULL, start is set to the oldest year in df.
end	Numeric. Optional. Specifies end year. If end = NULL, end is set to the youngest year in df.
linetype	String. Specifies linetype. linetype can take on values as mentioned in the geom_line documentation of ggplot2. Additionally, linetype can be set to "miRNA". If linetype = "miRNA", each miRNA name in mir has its own linetype.
alpha	Float. Opacity of lines.
width	Float. Width of dodging lines.
col.mir	Symbol. Column containing miRNA names.
col.year	Symbol. Column containing year.
title	String. Plot title.

Details

Plot how often a miRNA name was mentioned per year.

Value

Line plot displaying how often a miRNA name was mentioned per year..

See Also

Other miR development functions: plot_mir_new()

JulFriedrich/miRetrieve documentation built on Sept. 20, 2021, 11:37 p.m.